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Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study
Background: Ambient particles have been shown to exacerbate measures of biological aging; yet, no studies have examined their relationships with DNA methylation age (DNAm-age), an epigenome-wide DNA methylation based predictor of chronological age. Objective: We examined the relationship of DNAm-age...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4957520/ https://www.ncbi.nlm.nih.gov/pubmed/27453791 http://dx.doi.org/10.1093/eep/dvw006 |
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author | Nwanaji-Enwerem, Jamaji C. Colicino, Elena Trevisi, Letizia Kloog, Itai Just, Allan C. Shen, Jincheng Brennan, Kasey Dereix, Alexandra Hou, Lifang Vokonas, Pantel Schwartz, Joel Baccarelli, Andrea A. |
author_facet | Nwanaji-Enwerem, Jamaji C. Colicino, Elena Trevisi, Letizia Kloog, Itai Just, Allan C. Shen, Jincheng Brennan, Kasey Dereix, Alexandra Hou, Lifang Vokonas, Pantel Schwartz, Joel Baccarelli, Andrea A. |
author_sort | Nwanaji-Enwerem, Jamaji C. |
collection | PubMed |
description | Background: Ambient particles have been shown to exacerbate measures of biological aging; yet, no studies have examined their relationships with DNA methylation age (DNAm-age), an epigenome-wide DNA methylation based predictor of chronological age. Objective: We examined the relationship of DNAm-age with fine particulate matter (PM(2.5)), a measure of total inhalable particle mass, and black carbon (BC), a measure of particles from vehicular traffic. Methods: We used validated spatiotemporal models to generate 1-year PM(2.5) and BC exposure levels at the addresses of 589 older men participating in the VA Normative Aging Study with 1–3 visits between 2000 and 2011 (n = 1032 observations). Blood DNAm-age was calculated using 353 CpG sites from the Illumina HumanMethylation450 BeadChip. We estimated associations of PM(2.5) and BC with DNAm-age using linear mixed effects models adjusted for age, lifestyle/environmental factors, and aging-related diseases. Results: After adjusting for covariates, a 1-μg/m(3) increase in PM(2.5) (95% CI: 0.30, 0.75, P < 0.0001) was significantly associated with a 0.52-year increase in DNAm-age. Adjusted BC models showed similar patterns of association (β = 3.02, 95% CI: 0.48, 5.57, P = 0.02). Only PM(2.5) (β = 0.54, 95% CI: 0.24, 0.84, P = 0.0004) remained significantly associated with DNAm-age in two-particle models. Methylation levels from 20 of the 353 CpGs contributing to DNAm-age were significantly associated with PM(2.5) levels in our two-particle models. Several of these CpGs mapped to genes implicated in lung pathologies including LZTFL1, PDLIM5, and ATPAF1. Conclusion: Our results support an association of long-term ambient particle levels with DNAm-age and suggest that DNAm-age is a biomarker of particle-related physiological processes. |
format | Online Article Text |
id | pubmed-4957520 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-49575202016-07-22 Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study Nwanaji-Enwerem, Jamaji C. Colicino, Elena Trevisi, Letizia Kloog, Itai Just, Allan C. Shen, Jincheng Brennan, Kasey Dereix, Alexandra Hou, Lifang Vokonas, Pantel Schwartz, Joel Baccarelli, Andrea A. Environ Epigenet Research Article Background: Ambient particles have been shown to exacerbate measures of biological aging; yet, no studies have examined their relationships with DNA methylation age (DNAm-age), an epigenome-wide DNA methylation based predictor of chronological age. Objective: We examined the relationship of DNAm-age with fine particulate matter (PM(2.5)), a measure of total inhalable particle mass, and black carbon (BC), a measure of particles from vehicular traffic. Methods: We used validated spatiotemporal models to generate 1-year PM(2.5) and BC exposure levels at the addresses of 589 older men participating in the VA Normative Aging Study with 1–3 visits between 2000 and 2011 (n = 1032 observations). Blood DNAm-age was calculated using 353 CpG sites from the Illumina HumanMethylation450 BeadChip. We estimated associations of PM(2.5) and BC with DNAm-age using linear mixed effects models adjusted for age, lifestyle/environmental factors, and aging-related diseases. Results: After adjusting for covariates, a 1-μg/m(3) increase in PM(2.5) (95% CI: 0.30, 0.75, P < 0.0001) was significantly associated with a 0.52-year increase in DNAm-age. Adjusted BC models showed similar patterns of association (β = 3.02, 95% CI: 0.48, 5.57, P = 0.02). Only PM(2.5) (β = 0.54, 95% CI: 0.24, 0.84, P = 0.0004) remained significantly associated with DNAm-age in two-particle models. Methylation levels from 20 of the 353 CpGs contributing to DNAm-age were significantly associated with PM(2.5) levels in our two-particle models. Several of these CpGs mapped to genes implicated in lung pathologies including LZTFL1, PDLIM5, and ATPAF1. Conclusion: Our results support an association of long-term ambient particle levels with DNAm-age and suggest that DNAm-age is a biomarker of particle-related physiological processes. Oxford University Press 2016-06-12 /pmc/articles/PMC4957520/ /pubmed/27453791 http://dx.doi.org/10.1093/eep/dvw006 Text en © The Author 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Nwanaji-Enwerem, Jamaji C. Colicino, Elena Trevisi, Letizia Kloog, Itai Just, Allan C. Shen, Jincheng Brennan, Kasey Dereix, Alexandra Hou, Lifang Vokonas, Pantel Schwartz, Joel Baccarelli, Andrea A. Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title | Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title_full | Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title_fullStr | Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title_full_unstemmed | Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title_short | Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study |
title_sort | long-term ambient particle exposures and blood dna methylation age: findings from the va normative aging study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4957520/ https://www.ncbi.nlm.nih.gov/pubmed/27453791 http://dx.doi.org/10.1093/eep/dvw006 |
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