Cargando…

After All, Only Millions?

An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based r...

Descripción completa

Detalles Bibliográficos
Autores principales: Amann, Rudolf, Rosselló-Móra, Ramon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958260/
https://www.ncbi.nlm.nih.gov/pubmed/27381294
http://dx.doi.org/10.1128/mBio.00999-16
_version_ 1782444282818330624
author Amann, Rudolf
Rosselló-Móra, Ramon
author_facet Amann, Rudolf
Rosselló-Móra, Ramon
author_sort Amann, Rudolf
collection PubMed
description An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based retrieval of 16S rRNA genes is approaching saturation. On average, 95% of the genes analyzed today are identical to those present in public databases, with rarefaction analysis indicating that about one-third of the bacterial and archaeal diversity has already been covered. Therefore, despite estimates of up to 10(12) microbial species, the option should be considered that the census of Archaea and Bacteria on planet Earth might yield only millions of species after all.
format Online
Article
Text
id pubmed-4958260
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-49582602016-07-25 After All, Only Millions? Amann, Rudolf Rosselló-Móra, Ramon mBio Commentary An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based retrieval of 16S rRNA genes is approaching saturation. On average, 95% of the genes analyzed today are identical to those present in public databases, with rarefaction analysis indicating that about one-third of the bacterial and archaeal diversity has already been covered. Therefore, despite estimates of up to 10(12) microbial species, the option should be considered that the census of Archaea and Bacteria on planet Earth might yield only millions of species after all. American Society for Microbiology 2016-07-05 /pmc/articles/PMC4958260/ /pubmed/27381294 http://dx.doi.org/10.1128/mBio.00999-16 Text en Copyright © 2016 Amann and Rosselló-Móra. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Commentary
Amann, Rudolf
Rosselló-Móra, Ramon
After All, Only Millions?
title After All, Only Millions?
title_full After All, Only Millions?
title_fullStr After All, Only Millions?
title_full_unstemmed After All, Only Millions?
title_short After All, Only Millions?
title_sort after all, only millions?
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958260/
https://www.ncbi.nlm.nih.gov/pubmed/27381294
http://dx.doi.org/10.1128/mBio.00999-16
work_keys_str_mv AT amannrudolf afterallonlymillions
AT rossellomoraramon afterallonlymillions