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After All, Only Millions?
An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based r...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958260/ https://www.ncbi.nlm.nih.gov/pubmed/27381294 http://dx.doi.org/10.1128/mBio.00999-16 |
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author | Amann, Rudolf Rosselló-Móra, Ramon |
author_facet | Amann, Rudolf Rosselló-Móra, Ramon |
author_sort | Amann, Rudolf |
collection | PubMed |
description | An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based retrieval of 16S rRNA genes is approaching saturation. On average, 95% of the genes analyzed today are identical to those present in public databases, with rarefaction analysis indicating that about one-third of the bacterial and archaeal diversity has already been covered. Therefore, despite estimates of up to 10(12) microbial species, the option should be considered that the census of Archaea and Bacteria on planet Earth might yield only millions of species after all. |
format | Online Article Text |
id | pubmed-4958260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-49582602016-07-25 After All, Only Millions? Amann, Rudolf Rosselló-Móra, Ramon mBio Commentary An update on the census of species of Archaea and Bacteria published recently in mBio (P. D. Schloss, R. A. Girard, T. Martin, J. Edwards, and J. C. Thrash, mBio 7:e00201-16, 2016, http://dx.doi.org/10.1128/mBio.00201-16) showed again that, despite ever-increasing sequencing efforts, the PCR-based retrieval of 16S rRNA genes is approaching saturation. On average, 95% of the genes analyzed today are identical to those present in public databases, with rarefaction analysis indicating that about one-third of the bacterial and archaeal diversity has already been covered. Therefore, despite estimates of up to 10(12) microbial species, the option should be considered that the census of Archaea and Bacteria on planet Earth might yield only millions of species after all. American Society for Microbiology 2016-07-05 /pmc/articles/PMC4958260/ /pubmed/27381294 http://dx.doi.org/10.1128/mBio.00999-16 Text en Copyright © 2016 Amann and Rosselló-Móra. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Commentary Amann, Rudolf Rosselló-Móra, Ramon After All, Only Millions? |
title | After All, Only Millions? |
title_full | After All, Only Millions? |
title_fullStr | After All, Only Millions? |
title_full_unstemmed | After All, Only Millions? |
title_short | After All, Only Millions? |
title_sort | after all, only millions? |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958260/ https://www.ncbi.nlm.nih.gov/pubmed/27381294 http://dx.doi.org/10.1128/mBio.00999-16 |
work_keys_str_mv | AT amannrudolf afterallonlymillions AT rossellomoraramon afterallonlymillions |