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DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image f...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958949/ https://www.ncbi.nlm.nih.gov/pubmed/27453091 http://dx.doi.org/10.1038/srep30420 |
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author | Koos, Krisztian Molnár, József Kelemen, Lóránd Tamás, Gábor Horvath, Peter |
author_facet | Koos, Krisztian Molnár, József Kelemen, Lóránd Tamás, Gábor Horvath, Peter |
author_sort | Koos, Krisztian |
collection | PubMed |
description | Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image formation limits quantitative evaluation. Differential interference contrast (DIC) is a qualitative microscopy technique that shows the optical path length differences within a specimen. We propose a variational framework for DIC image reconstruction. The proposed method largely outperforms state-of-the-art methods on synthetic, artificial and real tests and turns DIC microscopy into an automated high-content imaging tool. Image sets and the source code of the examined algorithms are made publicly available. |
format | Online Article Text |
id | pubmed-4958949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49589492016-08-04 DIC image reconstruction using an energy minimization framework to visualize optical path length distribution Koos, Krisztian Molnár, József Kelemen, Lóránd Tamás, Gábor Horvath, Peter Sci Rep Article Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image formation limits quantitative evaluation. Differential interference contrast (DIC) is a qualitative microscopy technique that shows the optical path length differences within a specimen. We propose a variational framework for DIC image reconstruction. The proposed method largely outperforms state-of-the-art methods on synthetic, artificial and real tests and turns DIC microscopy into an automated high-content imaging tool. Image sets and the source code of the examined algorithms are made publicly available. Nature Publishing Group 2016-07-25 /pmc/articles/PMC4958949/ /pubmed/27453091 http://dx.doi.org/10.1038/srep30420 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Koos, Krisztian Molnár, József Kelemen, Lóránd Tamás, Gábor Horvath, Peter DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title | DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title_full | DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title_fullStr | DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title_full_unstemmed | DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title_short | DIC image reconstruction using an energy minimization framework to visualize optical path length distribution |
title_sort | dic image reconstruction using an energy minimization framework to visualize optical path length distribution |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958949/ https://www.ncbi.nlm.nih.gov/pubmed/27453091 http://dx.doi.org/10.1038/srep30420 |
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