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DIC image reconstruction using an energy minimization framework to visualize optical path length distribution

Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image f...

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Autores principales: Koos, Krisztian, Molnár, József, Kelemen, Lóránd, Tamás, Gábor, Horvath, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958949/
https://www.ncbi.nlm.nih.gov/pubmed/27453091
http://dx.doi.org/10.1038/srep30420
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author Koos, Krisztian
Molnár, József
Kelemen, Lóránd
Tamás, Gábor
Horvath, Peter
author_facet Koos, Krisztian
Molnár, József
Kelemen, Lóránd
Tamás, Gábor
Horvath, Peter
author_sort Koos, Krisztian
collection PubMed
description Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image formation limits quantitative evaluation. Differential interference contrast (DIC) is a qualitative microscopy technique that shows the optical path length differences within a specimen. We propose a variational framework for DIC image reconstruction. The proposed method largely outperforms state-of-the-art methods on synthetic, artificial and real tests and turns DIC microscopy into an automated high-content imaging tool. Image sets and the source code of the examined algorithms are made publicly available.
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spelling pubmed-49589492016-08-04 DIC image reconstruction using an energy minimization framework to visualize optical path length distribution Koos, Krisztian Molnár, József Kelemen, Lóránd Tamás, Gábor Horvath, Peter Sci Rep Article Label-free microscopy techniques have numerous advantages such as low phototoxicity, simple setup and no need for fluorophores or other contrast materials. Despite their advantages, most label-free techniques cannot visualize specific cellular compartments or the location of proteins and the image formation limits quantitative evaluation. Differential interference contrast (DIC) is a qualitative microscopy technique that shows the optical path length differences within a specimen. We propose a variational framework for DIC image reconstruction. The proposed method largely outperforms state-of-the-art methods on synthetic, artificial and real tests and turns DIC microscopy into an automated high-content imaging tool. Image sets and the source code of the examined algorithms are made publicly available. Nature Publishing Group 2016-07-25 /pmc/articles/PMC4958949/ /pubmed/27453091 http://dx.doi.org/10.1038/srep30420 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Koos, Krisztian
Molnár, József
Kelemen, Lóránd
Tamás, Gábor
Horvath, Peter
DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title_full DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title_fullStr DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title_full_unstemmed DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title_short DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
title_sort dic image reconstruction using an energy minimization framework to visualize optical path length distribution
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958949/
https://www.ncbi.nlm.nih.gov/pubmed/27453091
http://dx.doi.org/10.1038/srep30420
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