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RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results

As the use of large-scale data-driven analysis becomes increasingly common, the need for robust methods for interpreting a large number of results increases. To date, neuroimaging attempts to interpret large-scale activity or connectivity results often turn to existing neural mapping based on previo...

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Autores principales: Maron-Katz, Adi, Amar, David, Simon, Eti Ben, Hendler, Talma, Shamir, Ron
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959697/
https://www.ncbi.nlm.nih.gov/pubmed/27455041
http://dx.doi.org/10.1371/journal.pone.0159643
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author Maron-Katz, Adi
Amar, David
Simon, Eti Ben
Hendler, Talma
Shamir, Ron
author_facet Maron-Katz, Adi
Amar, David
Simon, Eti Ben
Hendler, Talma
Shamir, Ron
author_sort Maron-Katz, Adi
collection PubMed
description As the use of large-scale data-driven analysis becomes increasingly common, the need for robust methods for interpreting a large number of results increases. To date, neuroimaging attempts to interpret large-scale activity or connectivity results often turn to existing neural mapping based on previous literature. In case of a large number of results, manual selection or percent of overlap with existing maps is frequently used to facilitate interpretation, often without a clear statistical justification. Such methodology holds the risk of reporting false positive results and overlooking additional results. Here, we propose using enrichment analysis for improving the interpretation of large-scale neuroimaging results. We focus on two possible cases: position group analysis, where the identified results are a set of neural positions; and connection group analysis, where the identified results are a set of neural position-pairs (i.e. neural connections). We explore different models for detecting significant overrepresentation of known functional brain annotations using simulated and real data. We implemented our methods in a tool called RichMind, which provides both statistical significance reports and brain visualization. We demonstrate the abilities of RichMind by revisiting two previous fMRI studies. In both studies RichMind automatically highlighted most of the findings that were reported in the original studies as well as several additional findings that were overlooked. Hence, RichMind is a valuable new tool for rigorous inference from neuroimaging results.
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spelling pubmed-49596972016-08-08 RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results Maron-Katz, Adi Amar, David Simon, Eti Ben Hendler, Talma Shamir, Ron PLoS One Research Article As the use of large-scale data-driven analysis becomes increasingly common, the need for robust methods for interpreting a large number of results increases. To date, neuroimaging attempts to interpret large-scale activity or connectivity results often turn to existing neural mapping based on previous literature. In case of a large number of results, manual selection or percent of overlap with existing maps is frequently used to facilitate interpretation, often without a clear statistical justification. Such methodology holds the risk of reporting false positive results and overlooking additional results. Here, we propose using enrichment analysis for improving the interpretation of large-scale neuroimaging results. We focus on two possible cases: position group analysis, where the identified results are a set of neural positions; and connection group analysis, where the identified results are a set of neural position-pairs (i.e. neural connections). We explore different models for detecting significant overrepresentation of known functional brain annotations using simulated and real data. We implemented our methods in a tool called RichMind, which provides both statistical significance reports and brain visualization. We demonstrate the abilities of RichMind by revisiting two previous fMRI studies. In both studies RichMind automatically highlighted most of the findings that were reported in the original studies as well as several additional findings that were overlooked. Hence, RichMind is a valuable new tool for rigorous inference from neuroimaging results. Public Library of Science 2016-07-25 /pmc/articles/PMC4959697/ /pubmed/27455041 http://dx.doi.org/10.1371/journal.pone.0159643 Text en © 2016 Maron-Katz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Maron-Katz, Adi
Amar, David
Simon, Eti Ben
Hendler, Talma
Shamir, Ron
RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title_full RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title_fullStr RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title_full_unstemmed RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title_short RichMind: A Tool for Improved Inference from Large-Scale Neuroimaging Results
title_sort richmind: a tool for improved inference from large-scale neuroimaging results
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959697/
https://www.ncbi.nlm.nih.gov/pubmed/27455041
http://dx.doi.org/10.1371/journal.pone.0159643
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