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Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides

The nonenzymatic replication of RNA is a potential transitional stage between the prebiotic chemistry of nucleotide synthesis and the canonical RNA world in which RNA enzymes (ribozymes) catalyze replication of the RNA genomes of primordial cells. However, the plausibility of nonenzymatic RNA replic...

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Autores principales: Prywes, Noam, Blain, J Craig, Del Frate, Francesca, Szostak, Jack W
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959843/
https://www.ncbi.nlm.nih.gov/pubmed/27351102
http://dx.doi.org/10.7554/eLife.17756
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author Prywes, Noam
Blain, J Craig
Del Frate, Francesca
Szostak, Jack W
author_facet Prywes, Noam
Blain, J Craig
Del Frate, Francesca
Szostak, Jack W
author_sort Prywes, Noam
collection PubMed
description The nonenzymatic replication of RNA is a potential transitional stage between the prebiotic chemistry of nucleotide synthesis and the canonical RNA world in which RNA enzymes (ribozymes) catalyze replication of the RNA genomes of primordial cells. However, the plausibility of nonenzymatic RNA replication is undercut by the lack of a protocell-compatible chemical system capable of copying RNA templates containing all four nucleotides. We show that short 5′-activated oligonucleotides act as catalysts that accelerate primer extension, and allow for the one-pot copying of mixed sequence RNA templates. The fidelity of the primer extension products resulting from the sequential addition of activated monomers, when catalyzed by activated oligomers, is sufficient to sustain a genome long enough to encode active ribozymes. Finally, by immobilizing the primer and template on a bead and adding individual monomers in sequence, we synthesize a significant part of an active hammerhead ribozyme, forging a link between nonenzymatic polymerization and the RNA world. DOI: http://dx.doi.org/10.7554/eLife.17756.001
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spelling pubmed-49598432016-07-28 Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides Prywes, Noam Blain, J Craig Del Frate, Francesca Szostak, Jack W eLife Biochemistry The nonenzymatic replication of RNA is a potential transitional stage between the prebiotic chemistry of nucleotide synthesis and the canonical RNA world in which RNA enzymes (ribozymes) catalyze replication of the RNA genomes of primordial cells. However, the plausibility of nonenzymatic RNA replication is undercut by the lack of a protocell-compatible chemical system capable of copying RNA templates containing all four nucleotides. We show that short 5′-activated oligonucleotides act as catalysts that accelerate primer extension, and allow for the one-pot copying of mixed sequence RNA templates. The fidelity of the primer extension products resulting from the sequential addition of activated monomers, when catalyzed by activated oligomers, is sufficient to sustain a genome long enough to encode active ribozymes. Finally, by immobilizing the primer and template on a bead and adding individual monomers in sequence, we synthesize a significant part of an active hammerhead ribozyme, forging a link between nonenzymatic polymerization and the RNA world. DOI: http://dx.doi.org/10.7554/eLife.17756.001 eLife Sciences Publications, Ltd 2016-06-28 /pmc/articles/PMC4959843/ /pubmed/27351102 http://dx.doi.org/10.7554/eLife.17756 Text en © 2016, Prywes et al http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Biochemistry
Prywes, Noam
Blain, J Craig
Del Frate, Francesca
Szostak, Jack W
Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title_full Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title_fullStr Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title_full_unstemmed Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title_short Nonenzymatic copying of RNA templates containing all four letters is catalyzed by activated oligonucleotides
title_sort nonenzymatic copying of rna templates containing all four letters is catalyzed by activated oligonucleotides
topic Biochemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959843/
https://www.ncbi.nlm.nih.gov/pubmed/27351102
http://dx.doi.org/10.7554/eLife.17756
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