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Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records
BACKGROUND: Although physical illnesses, routinely documented in electronic medical records (EMR), have been found to be a contributing factor to suicides, no automated systems use this information to predict suicide risk. OBJECTIVE: The aim of this study is to quantify the impact of physical illnes...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications Inc.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4960407/ https://www.ncbi.nlm.nih.gov/pubmed/27400764 http://dx.doi.org/10.2196/mental.5475 |
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author | Karmakar, Chandan Luo, Wei Tran, Truyen Berk, Michael Venkatesh, Svetha |
author_facet | Karmakar, Chandan Luo, Wei Tran, Truyen Berk, Michael Venkatesh, Svetha |
author_sort | Karmakar, Chandan |
collection | PubMed |
description | BACKGROUND: Although physical illnesses, routinely documented in electronic medical records (EMR), have been found to be a contributing factor to suicides, no automated systems use this information to predict suicide risk. OBJECTIVE: The aim of this study is to quantify the impact of physical illnesses on suicide risk, and develop a predictive model that captures this relationship using EMR data. METHODS: We used history of physical illnesses (except chapter V: Mental and behavioral disorders) from EMR data over different time-periods to build a lookup table that contains the probability of suicide risk for each chapter of the International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10) codes. The lookup table was then used to predict the probability of suicide risk for any new assessment. Based on the different lengths of history of physical illnesses, we developed six different models to predict suicide risk. We tested the performance of developed models to predict 90-day risk using historical data over differing time-periods ranging from 3 to 48 months. A total of 16,858 assessments from 7399 mental health patients with at least one risk assessment was used for the validation of the developed model. The performance was measured using area under the receiver operating characteristic curve (AUC). RESULTS: The best predictive results were derived (AUC=0.71) using combined data across all time-periods, which significantly outperformed the clinical baseline derived from routine risk assessment (AUC=0.56). The proposed approach thus shows potential to be incorporated in the broader risk assessment processes used by clinicians. CONCLUSIONS: This study provides a novel approach to exploit the history of physical illnesses extracted from EMR (ICD-10 codes without chapter V-mental and behavioral disorders) to predict suicide risk, and this model outperforms existing clinical assessments of suicide risk. |
format | Online Article Text |
id | pubmed-4960407 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | JMIR Publications Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-49604072016-08-22 Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records Karmakar, Chandan Luo, Wei Tran, Truyen Berk, Michael Venkatesh, Svetha JMIR Ment Health Original Paper BACKGROUND: Although physical illnesses, routinely documented in electronic medical records (EMR), have been found to be a contributing factor to suicides, no automated systems use this information to predict suicide risk. OBJECTIVE: The aim of this study is to quantify the impact of physical illnesses on suicide risk, and develop a predictive model that captures this relationship using EMR data. METHODS: We used history of physical illnesses (except chapter V: Mental and behavioral disorders) from EMR data over different time-periods to build a lookup table that contains the probability of suicide risk for each chapter of the International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10) codes. The lookup table was then used to predict the probability of suicide risk for any new assessment. Based on the different lengths of history of physical illnesses, we developed six different models to predict suicide risk. We tested the performance of developed models to predict 90-day risk using historical data over differing time-periods ranging from 3 to 48 months. A total of 16,858 assessments from 7399 mental health patients with at least one risk assessment was used for the validation of the developed model. The performance was measured using area under the receiver operating characteristic curve (AUC). RESULTS: The best predictive results were derived (AUC=0.71) using combined data across all time-periods, which significantly outperformed the clinical baseline derived from routine risk assessment (AUC=0.56). The proposed approach thus shows potential to be incorporated in the broader risk assessment processes used by clinicians. CONCLUSIONS: This study provides a novel approach to exploit the history of physical illnesses extracted from EMR (ICD-10 codes without chapter V-mental and behavioral disorders) to predict suicide risk, and this model outperforms existing clinical assessments of suicide risk. JMIR Publications Inc. 2016-07-11 /pmc/articles/PMC4960407/ /pubmed/27400764 http://dx.doi.org/10.2196/mental.5475 Text en ©Chandan Karmakar, Wei Luo, Truyen Tran, Michael Berk, Svetha Venkatesh. Originally published in JMIR Mental Health (http://mental.jmir.org), 11.07.2016. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Mental Health, is properly cited. The complete bibliographic information, a link to the original publication on http://mental.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Karmakar, Chandan Luo, Wei Tran, Truyen Berk, Michael Venkatesh, Svetha Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title | Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title_full | Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title_fullStr | Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title_full_unstemmed | Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title_short | Predicting Risk of Suicide Attempt Using History of Physical Illnesses From Electronic Medical Records |
title_sort | predicting risk of suicide attempt using history of physical illnesses from electronic medical records |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4960407/ https://www.ncbi.nlm.nih.gov/pubmed/27400764 http://dx.doi.org/10.2196/mental.5475 |
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