pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data

pileup.js is a new browser-based genome viewer. It is designed to facilitate the investigation of evidence for genomic variants within larger web applications. It takes advantage of recent developments in the JavaScript ecosystem to provide a modular, reliable and easily embedded library. Availabili...

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Detalles Bibliográficos
Autores principales: Vanderkam, Dan, Aksoy, B. Arman, Hodes, Isaac, Perrone, Jaclyn, Hammerbacher, Jeff
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965634/
https://www.ncbi.nlm.nih.gov/pubmed/27153605
http://dx.doi.org/10.1093/bioinformatics/btw167
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author Vanderkam, Dan
Aksoy, B. Arman
Hodes, Isaac
Perrone, Jaclyn
Hammerbacher, Jeff
author_facet Vanderkam, Dan
Aksoy, B. Arman
Hodes, Isaac
Perrone, Jaclyn
Hammerbacher, Jeff
author_sort Vanderkam, Dan
collection PubMed
description pileup.js is a new browser-based genome viewer. It is designed to facilitate the investigation of evidence for genomic variants within larger web applications. It takes advantage of recent developments in the JavaScript ecosystem to provide a modular, reliable and easily embedded library. Availability and implementation: The code and documentation for pileup.js is publicly available at https://github.com/hammerlab/pileup.js under the Apache 2.0 license. Contact: correspondence@hammerlab.org
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spelling pubmed-49656342016-08-01 pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data Vanderkam, Dan Aksoy, B. Arman Hodes, Isaac Perrone, Jaclyn Hammerbacher, Jeff Bioinformatics Applications Notes pileup.js is a new browser-based genome viewer. It is designed to facilitate the investigation of evidence for genomic variants within larger web applications. It takes advantage of recent developments in the JavaScript ecosystem to provide a modular, reliable and easily embedded library. Availability and implementation: The code and documentation for pileup.js is publicly available at https://github.com/hammerlab/pileup.js under the Apache 2.0 license. Contact: correspondence@hammerlab.org Oxford University Press 2016-08-01 2016-03-29 /pmc/articles/PMC4965634/ /pubmed/27153605 http://dx.doi.org/10.1093/bioinformatics/btw167 Text en © The Author 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Notes
Vanderkam, Dan
Aksoy, B. Arman
Hodes, Isaac
Perrone, Jaclyn
Hammerbacher, Jeff
pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title_full pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title_fullStr pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title_full_unstemmed pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title_short pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
title_sort pileup.js: a javascript library for interactive and in-browser visualization of genomic data
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965634/
https://www.ncbi.nlm.nih.gov/pubmed/27153605
http://dx.doi.org/10.1093/bioinformatics/btw167
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