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Improving biomedical information retrieval by linear combinations of different query expansion techniques

BACKGROUND: Biomedical literature retrieval is becoming increasingly complex, and there is a fundamental need for advanced information retrieval systems. Information Retrieval (IR) programs scour unstructured materials such as text documents in large reserves of data that are usually stored on compu...

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Autores principales: Abdulla, Ahmed AbdoAziz Ahmed, Lin, Hongfei, Xu, Bo, Banbhrani, Santosh Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965722/
https://www.ncbi.nlm.nih.gov/pubmed/27455377
http://dx.doi.org/10.1186/s12859-016-1092-8
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author Abdulla, Ahmed AbdoAziz Ahmed
Lin, Hongfei
Xu, Bo
Banbhrani, Santosh Kumar
author_facet Abdulla, Ahmed AbdoAziz Ahmed
Lin, Hongfei
Xu, Bo
Banbhrani, Santosh Kumar
author_sort Abdulla, Ahmed AbdoAziz Ahmed
collection PubMed
description BACKGROUND: Biomedical literature retrieval is becoming increasingly complex, and there is a fundamental need for advanced information retrieval systems. Information Retrieval (IR) programs scour unstructured materials such as text documents in large reserves of data that are usually stored on computers. IR is related to the representation, storage, and organization of information items, as well as to access. In IR one of the main problems is to determine which documents are relevant and which are not to the user’s needs. Under the current regime, users cannot precisely construct queries in an accurate way to retrieve particular pieces of data from large reserves of data. Basic information retrieval systems are producing low-quality search results. In our proposed system for this paper we present a new technique to refine Information Retrieval searches to better represent the user’s information need in order to enhance the performance of information retrieval by using different query expansion techniques and apply a linear combinations between them, where the combinations was linearly between two expansion results at one time. Query expansions expand the search query, for example, by finding synonyms and reweighting original terms. They provide significantly more focused, particularized search results than do basic search queries. RESULTS: The retrieval performance is measured by some variants of MAP (Mean Average Precision) and according to our experimental results, the combination of best results of query expansion is enhanced the retrieved documents and outperforms our baseline by 21.06 %, even it outperforms a previous study by 7.12 %. CONCLUSIONS: We propose several query expansion techniques and their combinations (linearly) to make user queries more cognizable to search engines and to produce higher-quality search results.
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spelling pubmed-49657222016-08-02 Improving biomedical information retrieval by linear combinations of different query expansion techniques Abdulla, Ahmed AbdoAziz Ahmed Lin, Hongfei Xu, Bo Banbhrani, Santosh Kumar BMC Bioinformatics Research BACKGROUND: Biomedical literature retrieval is becoming increasingly complex, and there is a fundamental need for advanced information retrieval systems. Information Retrieval (IR) programs scour unstructured materials such as text documents in large reserves of data that are usually stored on computers. IR is related to the representation, storage, and organization of information items, as well as to access. In IR one of the main problems is to determine which documents are relevant and which are not to the user’s needs. Under the current regime, users cannot precisely construct queries in an accurate way to retrieve particular pieces of data from large reserves of data. Basic information retrieval systems are producing low-quality search results. In our proposed system for this paper we present a new technique to refine Information Retrieval searches to better represent the user’s information need in order to enhance the performance of information retrieval by using different query expansion techniques and apply a linear combinations between them, where the combinations was linearly between two expansion results at one time. Query expansions expand the search query, for example, by finding synonyms and reweighting original terms. They provide significantly more focused, particularized search results than do basic search queries. RESULTS: The retrieval performance is measured by some variants of MAP (Mean Average Precision) and according to our experimental results, the combination of best results of query expansion is enhanced the retrieved documents and outperforms our baseline by 21.06 %, even it outperforms a previous study by 7.12 %. CONCLUSIONS: We propose several query expansion techniques and their combinations (linearly) to make user queries more cognizable to search engines and to produce higher-quality search results. BioMed Central 2016-07-25 /pmc/articles/PMC4965722/ /pubmed/27455377 http://dx.doi.org/10.1186/s12859-016-1092-8 Text en © Abdulla et al. 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Abdulla, Ahmed AbdoAziz Ahmed
Lin, Hongfei
Xu, Bo
Banbhrani, Santosh Kumar
Improving biomedical information retrieval by linear combinations of different query expansion techniques
title Improving biomedical information retrieval by linear combinations of different query expansion techniques
title_full Improving biomedical information retrieval by linear combinations of different query expansion techniques
title_fullStr Improving biomedical information retrieval by linear combinations of different query expansion techniques
title_full_unstemmed Improving biomedical information retrieval by linear combinations of different query expansion techniques
title_short Improving biomedical information retrieval by linear combinations of different query expansion techniques
title_sort improving biomedical information retrieval by linear combinations of different query expansion techniques
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965722/
https://www.ncbi.nlm.nih.gov/pubmed/27455377
http://dx.doi.org/10.1186/s12859-016-1092-8
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