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Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy
Acute leukemia is a critical neoplasm of white blood cells. In order to differentiate between the metabolic alterations associated with two subtypes of acute leukemia, acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML), we investigated the serum of ALL and AML patients and compared...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4969755/ https://www.ncbi.nlm.nih.gov/pubmed/27480133 http://dx.doi.org/10.1038/srep30693 |
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author | Musharraf, Syed Ghulam Siddiqui, Amna Jabbar Shamsi, Tahir Choudhary, M. Iqbal Rahman, Atta-ur |
author_facet | Musharraf, Syed Ghulam Siddiqui, Amna Jabbar Shamsi, Tahir Choudhary, M. Iqbal Rahman, Atta-ur |
author_sort | Musharraf, Syed Ghulam |
collection | PubMed |
description | Acute leukemia is a critical neoplasm of white blood cells. In order to differentiate between the metabolic alterations associated with two subtypes of acute leukemia, acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML), we investigated the serum of ALL and AML patients and compared with two controls (healthy and aplastic anemia) using (1)H NMR (nuclear magnetic resonance) spectroscopy. Thirty-seven putative metabolites were identified using Carr-Purcell-Meiboom-Gill (CPMG) sequence. The use of PLS-DA and OPLS-DA models gave results with 84.38% and 90.63% classification rate, respectively. The metabolites responsible for classification are mainly lipids, lactate and glucose. Compared with controls, ALL and AML patients showed serum metabonomic differences involving aberrant metabolism pathways including glycolysis, TCA cycle, lipoprotein changes, choline and fatty acid metabolisms. |
format | Online Article Text |
id | pubmed-4969755 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49697552016-08-11 Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy Musharraf, Syed Ghulam Siddiqui, Amna Jabbar Shamsi, Tahir Choudhary, M. Iqbal Rahman, Atta-ur Sci Rep Article Acute leukemia is a critical neoplasm of white blood cells. In order to differentiate between the metabolic alterations associated with two subtypes of acute leukemia, acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML), we investigated the serum of ALL and AML patients and compared with two controls (healthy and aplastic anemia) using (1)H NMR (nuclear magnetic resonance) spectroscopy. Thirty-seven putative metabolites were identified using Carr-Purcell-Meiboom-Gill (CPMG) sequence. The use of PLS-DA and OPLS-DA models gave results with 84.38% and 90.63% classification rate, respectively. The metabolites responsible for classification are mainly lipids, lactate and glucose. Compared with controls, ALL and AML patients showed serum metabonomic differences involving aberrant metabolism pathways including glycolysis, TCA cycle, lipoprotein changes, choline and fatty acid metabolisms. Nature Publishing Group 2016-08-02 /pmc/articles/PMC4969755/ /pubmed/27480133 http://dx.doi.org/10.1038/srep30693 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Musharraf, Syed Ghulam Siddiqui, Amna Jabbar Shamsi, Tahir Choudhary, M. Iqbal Rahman, Atta-ur Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title | Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title_full | Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title_fullStr | Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title_full_unstemmed | Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title_short | Serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
title_sort | serum metabonomics of acute leukemia using nuclear magnetic resonance spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4969755/ https://www.ncbi.nlm.nih.gov/pubmed/27480133 http://dx.doi.org/10.1038/srep30693 |
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