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Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants

This paper presents the results of verification of certain non-contact measurement methods of plant scanning to estimate morphological parameters such as length, width, area, volume of leaves and/or stems on the basis of computer models. The best results in reproducing the shape of scanned objects u...

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Detalles Bibliográficos
Autores principales: Drapikowski, Paweł, Kazimierczak-Grygiel, Ewa, Korecki, Dominik, Wiland-Szymańska, Justyna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4969998/
https://www.ncbi.nlm.nih.gov/pubmed/27355949
http://dx.doi.org/10.3390/s16070924
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author Drapikowski, Paweł
Kazimierczak-Grygiel, Ewa
Korecki, Dominik
Wiland-Szymańska, Justyna
author_facet Drapikowski, Paweł
Kazimierczak-Grygiel, Ewa
Korecki, Dominik
Wiland-Szymańska, Justyna
author_sort Drapikowski, Paweł
collection PubMed
description This paper presents the results of verification of certain non-contact measurement methods of plant scanning to estimate morphological parameters such as length, width, area, volume of leaves and/or stems on the basis of computer models. The best results in reproducing the shape of scanned objects up to 50 cm in height were obtained with the structured-light DAVID Laserscanner. The optimal triangle mesh resolution for scanned surfaces was determined with the measurement error taken into account. The research suggests that measuring morphological parameters from computer models can supplement or even replace phenotyping with classic methods. Calculating precise values of area and volume makes determination of the S/V (surface/volume) ratio for cacti and other succulents possible, whereas for classic methods the result is an approximation only. In addition, the possibility of scanning and measuring plant species which differ in morphology was investigated.
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spelling pubmed-49699982016-08-04 Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants Drapikowski, Paweł Kazimierczak-Grygiel, Ewa Korecki, Dominik Wiland-Szymańska, Justyna Sensors (Basel) Article This paper presents the results of verification of certain non-contact measurement methods of plant scanning to estimate morphological parameters such as length, width, area, volume of leaves and/or stems on the basis of computer models. The best results in reproducing the shape of scanned objects up to 50 cm in height were obtained with the structured-light DAVID Laserscanner. The optimal triangle mesh resolution for scanned surfaces was determined with the measurement error taken into account. The research suggests that measuring morphological parameters from computer models can supplement or even replace phenotyping with classic methods. Calculating precise values of area and volume makes determination of the S/V (surface/volume) ratio for cacti and other succulents possible, whereas for classic methods the result is an approximation only. In addition, the possibility of scanning and measuring plant species which differ in morphology was investigated. MDPI 2016-06-27 /pmc/articles/PMC4969998/ /pubmed/27355949 http://dx.doi.org/10.3390/s16070924 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Drapikowski, Paweł
Kazimierczak-Grygiel, Ewa
Korecki, Dominik
Wiland-Szymańska, Justyna
Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title_full Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title_fullStr Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title_full_unstemmed Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title_short Verification of Geometric Model-Based Plant Phenotyping Methods for Studies of Xerophytic Plants
title_sort verification of geometric model-based plant phenotyping methods for studies of xerophytic plants
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4969998/
https://www.ncbi.nlm.nih.gov/pubmed/27355949
http://dx.doi.org/10.3390/s16070924
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