Cargando…
Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient
Cyanobacteria associated with biological soil crusts (BSCs) have important attributes, such as nitrogen fixation and soil stabilisation. However, research on these organisms has been minimal, and their diversity and distribution throughout temperate Europe is currently unknown. The SCIN (Soil Crust...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4970567/ https://www.ncbi.nlm.nih.gov/pubmed/27411981 http://dx.doi.org/10.1093/femsec/fiw157 |
_version_ | 1782445989049663488 |
---|---|
author | Williams, Laura Loewen-Schneider, Katharina Maier, Stefanie Büdel, Burkhard |
author_facet | Williams, Laura Loewen-Schneider, Katharina Maier, Stefanie Büdel, Burkhard |
author_sort | Williams, Laura |
collection | PubMed |
description | Cyanobacteria associated with biological soil crusts (BSCs) have important attributes, such as nitrogen fixation and soil stabilisation. However, research on these organisms has been minimal, and their diversity and distribution throughout temperate Europe is currently unknown. The SCIN (Soil Crust International) project is a multidisciplinary research initiative that aims to achieve improved understanding of the BSCs of Europe, one facet being an investigation into the cyanobacterial communities of BSCs across a latitudinal gradient. Cyanobacteria assemblages were analysed by both morphological and molecular analysis. Two treatments were applied prior to DNA extraction, continued sample wetting and a dry sample process, and 16S ribosomal RNA (rRNA) amplicons were processed by Illumina MiSeq sequencing. The results reveal high and variable cyanobacterial diversity with each site showing a unique assemblage. Many common cyanobacterial genera, for example Nostoc and Microcoleus, were found in all sites but the abundances of different genera varied considerably. The polyphasic approach was found to be essential in recording the presence of important cyanobacteria that a single method itself did not highlight. The wet and dry treatments showed some differences in diversity, but mainly in abundance, this may suggest how cyanobacterial composition of BSCs changes with seasonal variability. |
format | Online Article Text |
id | pubmed-4970567 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-49705672016-08-03 Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient Williams, Laura Loewen-Schneider, Katharina Maier, Stefanie Büdel, Burkhard FEMS Microbiol Ecol Research Article Cyanobacteria associated with biological soil crusts (BSCs) have important attributes, such as nitrogen fixation and soil stabilisation. However, research on these organisms has been minimal, and their diversity and distribution throughout temperate Europe is currently unknown. The SCIN (Soil Crust International) project is a multidisciplinary research initiative that aims to achieve improved understanding of the BSCs of Europe, one facet being an investigation into the cyanobacterial communities of BSCs across a latitudinal gradient. Cyanobacteria assemblages were analysed by both morphological and molecular analysis. Two treatments were applied prior to DNA extraction, continued sample wetting and a dry sample process, and 16S ribosomal RNA (rRNA) amplicons were processed by Illumina MiSeq sequencing. The results reveal high and variable cyanobacterial diversity with each site showing a unique assemblage. Many common cyanobacterial genera, for example Nostoc and Microcoleus, were found in all sites but the abundances of different genera varied considerably. The polyphasic approach was found to be essential in recording the presence of important cyanobacteria that a single method itself did not highlight. The wet and dry treatments showed some differences in diversity, but mainly in abundance, this may suggest how cyanobacterial composition of BSCs changes with seasonal variability. Oxford University Press 2016-07-12 2016-10-01 /pmc/articles/PMC4970567/ /pubmed/27411981 http://dx.doi.org/10.1093/femsec/fiw157 Text en © FEMS 2016. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Williams, Laura Loewen-Schneider, Katharina Maier, Stefanie Büdel, Burkhard Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title | Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title_full | Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title_fullStr | Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title_full_unstemmed | Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title_short | Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient |
title_sort | cyanobacterial diversity of western european biological soil crusts along a latitudinal gradient |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4970567/ https://www.ncbi.nlm.nih.gov/pubmed/27411981 http://dx.doi.org/10.1093/femsec/fiw157 |
work_keys_str_mv | AT williamslaura cyanobacterialdiversityofwesterneuropeanbiologicalsoilcrustsalongalatitudinalgradient AT loewenschneiderkatharina cyanobacterialdiversityofwesterneuropeanbiologicalsoilcrustsalongalatitudinalgradient AT maierstefanie cyanobacterialdiversityofwesterneuropeanbiologicalsoilcrustsalongalatitudinalgradient AT budelburkhard cyanobacterialdiversityofwesterneuropeanbiologicalsoilcrustsalongalatitudinalgradient |