Cargando…

Asymmetric Regulation of Peripheral Genes by Two Transcriptional Regulatory Networks

Transcriptional regulatory network (TRN) reconstitution and deconstruction occur simultaneously during reprogramming; however, it remains unclear how the starting and targeting TRNs regulate the induction and suppression of peripheral genes. Here we analyzed the regulation using direct cell reprogra...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Jing-Ru, Suzuki, Takahiro, Nishimura, Hajime, Kishima, Mami, Maeda, Shiori, Suzuki, Harukazu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4970704/ https://www.ncbi.nlm.nih.gov/pubmed/27483142 http://dx.doi.org/10.1371/journal.pone.0160459

Ejemplares similares

RUNX1 induces DNA replication independent of active DNA demethylation at SPI1 regulatory regions
por: Goyal, Shubham, et al.
Publicado: (2017)

Erratum to: RUNX1 induces DNA replication independent active DNA demethylation at SPI1 regulatory regions
por: Goyal, Shubham, et al.
Publicado: (2017)

A screening system to identify transcription factors that induce binding site-directed DNA demethylation
por: Suzuki, Takahiro, et al.
Publicado: (2017)

GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation
por: Suzuki, Takahiro, et al.
Publicado: (2022)

A dataset of definitive endoderm and hepatocyte differentiations from human induced pluripotent stem cells
por: Tanaka, Yuki, et al.
Publicado: (2023)

Prediction of transcription factors associated with DNA demethylation during human cellular development
por: Miyajima, Yurina, et al.
Publicado: (2022)

Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming
por: Shin, Jay W., et al.
Publicado: (2012)

A transient disruption of fibroblastic transcriptional regulatory network facilitates trans-differentiation
por: Tomaru, Yasuhiro, et al.
Publicado: (2014)

OVOL2 induces mesenchymal-to-epithelial transition in fibroblasts and enhances cell-state reprogramming towards epithelial lineages
por: Watanabe, Kazuhide, et al.
Publicado: (2019)

Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
por: Suzuki, Takahiro, et al.
Publicado: (2012)

Time-course microarray transcriptome data of in vitro cultured testes and age-matched in vivo testes
por: Abe, Takeru, et al.
Publicado: (2020)

Building promoter aware transcriptional regulatory networks using siRNA perturbation and deepCAGE
por: Vitezic, Morana, et al.
Publicado: (2010)

Transcriptional features of genomic regulatory blocks
por: Akalin, Altuna, et al.
Publicado: (2009)

Loss of variation of state detected in soybean metabolic and human myelomonocytic leukaemia cell transcriptional networks under external stimuli
por: Sakata, Katsumi, et al.
Publicado: (2016)

System-wide analysis of the transcriptional network of human myelomonocytic leukemia cells predicts attractor structure and phorbol-ester-induced differentiation and dedifferentiation transitions
por: Sakata, Katsumi, et al.
Publicado: (2015)

A framework for identification of on- and off-target transcriptional responses to drug treatment
por: Huang, Yi, et al.
Publicado: (2019)

Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
por: Lizio, Marina, et al.
Publicado: (2015)

High-resolution analysis of aberrant regions in autosomal chromosomes in human leukemia THP-1 cell line
por: Adati, Naoki, et al.
Publicado: (2009)

Ligand-specific sequential regulation of transcription factors for differentiation of MCF-7 cells
por: Saeki, Yuko, et al.
Publicado: (2009)

Transcriptionally induced enhancers in the macrophage immune response to Mycobacterium tuberculosis infection
por: Denisenko, Elena, et al.
Publicado: (2019)

Search for regulatory factors of the pituitary-specific transcription factor PROP1 gene
por: NISHIMURA, Naoto, et al.
Publicado: (2015)

xcore: an R package for inference of gene expression regulators
por: Migdał, Maciej, et al.
Publicado: (2023)

Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila
por: Stoiber, Marcus H., et al.
Publicado: (2015)

Gene Regulatory Networks in Peripheral Mononuclear Cells Reveals Critical Regulatory Modules and Regulators of Multiple Sclerosis
por: Gnanakkumaar, Perumal, et al.
Publicado: (2019)

Identification of DNA regions and a set of transcriptional regulatory factors involved in transcriptional regulation of several human liver-enriched transcription factor genes
por: Miura, Hisashi, et al.
Publicado: (2009)

Identification of an inter-transcription factor regulatory network in human hepatoma cells by Matrix RNAi
por: Tomaru, Yasuhiro, et al.
Publicado: (2009)

Dynamic Regulation of Extracellular Signal-Regulated Kinase (ERK) by Protein Phosphatase 2A Regulatory Subunit B56γ1 in Nuclei Induces Cell Migration
por: Kawahara, Ei, et al.
Publicado: (2013)

Human genome research enters a new phase
por: Suzuki, Harukazu, et al.
Publicado: (2005)

Correction: Dynamic Regulation of Extracellular Signal-Regulated Kinase (ERK) by Protein Phosphatase 2A Regulatory Subunit B56γ1 in Nuclei Induces Cell Migration
por: Kawahara, Ei, et al.
Publicado: (2013)

The co-regulation mechanism of transcription factors in the human gene regulatory network
por: Kim, Junil, et al.
Publicado: (2012)

Deciphering transcriptional regulators of banana fruit ripening by regulatory network analysis
por: Kuang, Jian‐Fei, et al.
Publicado: (2020)

Side-to-side differences of three-dimensional knee kinematics during walking by normal subjects
por: Ino, Takumi, et al.
Publicado: (2015)

Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics
por: Roy, Sugata, et al.
Publicado: (2015)

ANAC032 regulates root growth through the MYB30 gene regulatory network
por: Maki, Hiromasa, et al.
Publicado: (2019)

Combinatorial perturbation analysis reveals divergent regulations of mesenchymal genes during epithelial-to-mesenchymal transition
por: Watanabe, Kazuhide, et al.
Publicado: (2019)

The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation
por: Kawaji, Hideya, et al.
Publicado: (2009)

Genome-wide investigation of in vivo EGR-1 binding sites in monocytic differentiation
por: Kubosaki, Atsutaka, et al.
Publicado: (2009)

Stability and evolution of transcriptional regulatory networks
por: Zaret, Kenneth S
Publicado: (2006)

The Transcriptional Regulatory Network of Mycobacterium tuberculosis
por: Sanz, Joaquín, et al.
Publicado: (2011)

The Transcriptional Regulatory Network of Corynebacterium pseudotuberculosis
por: Parise, Doglas, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_3qabdtu2kmsua17tbef7l8kktv