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Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing

Rhesus macaques (RMs) are a widely used model system for the study of vaccines, infectious diseases and microbial pathogenesis. Their value as a model lies in their close evolutionary relationship to humans, which, in theory, allows them to serve as a close approximation of the human immune system....

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Autores principales: Vigdorovich, Vladimir, Oliver, Brian G, Carbonetti, Sara, Dambrauskas, Nicholas, Lange, Miles D, Yacoob, Christina, Leahy, Will, Callahan, Jonathan, Stamatatos, Leonidas, Sather, D Noah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973324/
https://www.ncbi.nlm.nih.gov/pubmed/27525066
http://dx.doi.org/10.1038/cti.2016.42
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author Vigdorovich, Vladimir
Oliver, Brian G
Carbonetti, Sara
Dambrauskas, Nicholas
Lange, Miles D
Yacoob, Christina
Leahy, Will
Callahan, Jonathan
Stamatatos, Leonidas
Sather, D Noah
author_facet Vigdorovich, Vladimir
Oliver, Brian G
Carbonetti, Sara
Dambrauskas, Nicholas
Lange, Miles D
Yacoob, Christina
Leahy, Will
Callahan, Jonathan
Stamatatos, Leonidas
Sather, D Noah
author_sort Vigdorovich, Vladimir
collection PubMed
description Rhesus macaques (RMs) are a widely used model system for the study of vaccines, infectious diseases and microbial pathogenesis. Their value as a model lies in their close evolutionary relationship to humans, which, in theory, allows them to serve as a close approximation of the human immune system. However, despite their prominence as a human surrogate model system, many aspects of the RM immune system remain ill characterized. In particular, B cell-mediated immunity in macaques has not been sufficiently characterized, and the B-cell receptor-encoding loci have not been thoroughly annotated. To address these gaps, we analyzed the circulating heavy- and light-chain repertoires in humans and RMs by next-generation sequencing. By comparing V gene segment usage, J-segment usage and CDR3 lengths between the two species, we identified several important similarities and differences. These differences were especially notable in the IgM(+) B-cell repertoire. However, the class-switched, antigen-educated B-cell populations converged on a set of similar characteristics, implying similarities in how each species responds to antigen. Our study provides the first comprehensive overview of the circulating repertoires of the heavy- and light-chain sequences in RMs, and provides insight into how they may perform as a model system for B cell-mediated immunity in humans.
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spelling pubmed-49733242016-08-12 Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing Vigdorovich, Vladimir Oliver, Brian G Carbonetti, Sara Dambrauskas, Nicholas Lange, Miles D Yacoob, Christina Leahy, Will Callahan, Jonathan Stamatatos, Leonidas Sather, D Noah Clin Transl Immunology Original Article Rhesus macaques (RMs) are a widely used model system for the study of vaccines, infectious diseases and microbial pathogenesis. Their value as a model lies in their close evolutionary relationship to humans, which, in theory, allows them to serve as a close approximation of the human immune system. However, despite their prominence as a human surrogate model system, many aspects of the RM immune system remain ill characterized. In particular, B cell-mediated immunity in macaques has not been sufficiently characterized, and the B-cell receptor-encoding loci have not been thoroughly annotated. To address these gaps, we analyzed the circulating heavy- and light-chain repertoires in humans and RMs by next-generation sequencing. By comparing V gene segment usage, J-segment usage and CDR3 lengths between the two species, we identified several important similarities and differences. These differences were especially notable in the IgM(+) B-cell repertoire. However, the class-switched, antigen-educated B-cell populations converged on a set of similar characteristics, implying similarities in how each species responds to antigen. Our study provides the first comprehensive overview of the circulating repertoires of the heavy- and light-chain sequences in RMs, and provides insight into how they may perform as a model system for B cell-mediated immunity in humans. Nature Publishing Group 2016-07-22 /pmc/articles/PMC4973324/ /pubmed/27525066 http://dx.doi.org/10.1038/cti.2016.42 Text en Copyright © 2016 The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Original Article
Vigdorovich, Vladimir
Oliver, Brian G
Carbonetti, Sara
Dambrauskas, Nicholas
Lange, Miles D
Yacoob, Christina
Leahy, Will
Callahan, Jonathan
Stamatatos, Leonidas
Sather, D Noah
Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title_full Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title_fullStr Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title_full_unstemmed Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title_short Repertoire comparison of the B-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
title_sort repertoire comparison of the b-cell receptor-encoding loci in humans and rhesus macaques by next-generation sequencing
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973324/
https://www.ncbi.nlm.nih.gov/pubmed/27525066
http://dx.doi.org/10.1038/cti.2016.42
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