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Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae
BACKGROUND: Photosynthetic organisms can be used for renewable and sustainable production of fuels and high-value compounds from natural resources. Costs for design and operation of large-scale algae cultivation systems can be reduced if data from laboratory scale cultivations are combined with deta...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973557/ https://www.ncbi.nlm.nih.gov/pubmed/27493687 http://dx.doi.org/10.1186/s13068-016-0556-4 |
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author | Flassig, Robert J. Fachet, Melanie Höffner, Kai Barton, Paul I. Sundmacher, Kai |
author_facet | Flassig, Robert J. Fachet, Melanie Höffner, Kai Barton, Paul I. Sundmacher, Kai |
author_sort | Flassig, Robert J. |
collection | PubMed |
description | BACKGROUND: Photosynthetic organisms can be used for renewable and sustainable production of fuels and high-value compounds from natural resources. Costs for design and operation of large-scale algae cultivation systems can be reduced if data from laboratory scale cultivations are combined with detailed mathematical models to evaluate and optimize the process. RESULTS: In this work we present a flexible modeling formulation for accumulation of high-value storage molecules in microalgae that provides quantitative predictions under various light and nutrient conditions. The modeling approach is based on dynamic flux balance analysis (DFBA) and includes regulatory models to predict the accumulation of pigment molecules. The accuracy of the model predictions is validated through independent experimental data followed by a subsequent model-based fed-batch optimization. In our experimentally validated fed-batch optimization study we increase biomass and [Formula: see text] -carotene density by factors of about 2.5 and 2.1, respectively. CONCLUSIONS: The analysis shows that a model-based approach can be used to develop and significantly improve biotechnological processes for biofuels and pigments. |
format | Online Article Text |
id | pubmed-4973557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-49735572016-08-05 Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae Flassig, Robert J. Fachet, Melanie Höffner, Kai Barton, Paul I. Sundmacher, Kai Biotechnol Biofuels Research BACKGROUND: Photosynthetic organisms can be used for renewable and sustainable production of fuels and high-value compounds from natural resources. Costs for design and operation of large-scale algae cultivation systems can be reduced if data from laboratory scale cultivations are combined with detailed mathematical models to evaluate and optimize the process. RESULTS: In this work we present a flexible modeling formulation for accumulation of high-value storage molecules in microalgae that provides quantitative predictions under various light and nutrient conditions. The modeling approach is based on dynamic flux balance analysis (DFBA) and includes regulatory models to predict the accumulation of pigment molecules. The accuracy of the model predictions is validated through independent experimental data followed by a subsequent model-based fed-batch optimization. In our experimentally validated fed-batch optimization study we increase biomass and [Formula: see text] -carotene density by factors of about 2.5 and 2.1, respectively. CONCLUSIONS: The analysis shows that a model-based approach can be used to develop and significantly improve biotechnological processes for biofuels and pigments. BioMed Central 2016-08-04 /pmc/articles/PMC4973557/ /pubmed/27493687 http://dx.doi.org/10.1186/s13068-016-0556-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Flassig, Robert J. Fachet, Melanie Höffner, Kai Barton, Paul I. Sundmacher, Kai Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title | Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title_full | Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title_fullStr | Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title_full_unstemmed | Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title_short | Dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
title_sort | dynamic flux balance modeling to increase the production of high-value compounds in green microalgae |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973557/ https://www.ncbi.nlm.nih.gov/pubmed/27493687 http://dx.doi.org/10.1186/s13068-016-0556-4 |
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