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Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Academy of Medical Sciences
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974179/ https://www.ncbi.nlm.nih.gov/pubmed/27510381 http://dx.doi.org/10.3346/jkms.2016.31.9.1392 |
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author | Ma, Youngeun Lee, Ji Won Park, Soo Jin Yi, Eun Sang Choi, Young Bae Yoo, Keon Hee Sung, Ki Woong Koo, Hong Hoe |
author_facet | Ma, Youngeun Lee, Ji Won Park, Soo Jin Yi, Eun Sang Choi, Young Bae Yoo, Keon Hee Sung, Ki Woong Koo, Hong Hoe |
author_sort | Ma, Youngeun |
collection | PubMed |
description | Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and invasive procedures are unavoidable. To evaluate the possibility of detecting MYCN amplification without invasive procedure, we performed conventional polymerase chain reaction (PCR) analysis to identify MYCN amplification using the preserved serum DNA. PCR of serum DNA was done in 105 NB patients whose MYCN status had been confirmed by fluorescence in situ hybridization. MYCN amplification was evaluated as the ratio of signal intensities between MYCN and NAGK (M/N ratio). When regarding the tissue FISH results as a reference, 10 patients had MYCN-amplified (MNA) NB, and 95 had non-MNA NB. The M/N ratio of the MNA group (median 2.56, range 1.01-3.58) was significantly higher than that of the non-MNA group (median 0.97, range 0.67-5.18) (P < 0.001). In the receiver operating characteristic curve analysis, the area under the curve was 0.957 (95% confidence interval 0.898–1.000; P < 0.001), and it showed 90.9% sensitivity and 97.9% specificity with the selected cut-off value set as 1.6. The detection of MYCN amplification using conventional PCR analysis of serum samples seems to be a simple and promising method to evaluate the MYCN status of NB patients. Further study with a larger set of patients is needed to confirm the accuracy of this result. |
format | Online Article Text |
id | pubmed-4974179 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Korean Academy of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-49741792016-09-01 Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction Ma, Youngeun Lee, Ji Won Park, Soo Jin Yi, Eun Sang Choi, Young Bae Yoo, Keon Hee Sung, Ki Woong Koo, Hong Hoe J Korean Med Sci Original Article Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and invasive procedures are unavoidable. To evaluate the possibility of detecting MYCN amplification without invasive procedure, we performed conventional polymerase chain reaction (PCR) analysis to identify MYCN amplification using the preserved serum DNA. PCR of serum DNA was done in 105 NB patients whose MYCN status had been confirmed by fluorescence in situ hybridization. MYCN amplification was evaluated as the ratio of signal intensities between MYCN and NAGK (M/N ratio). When regarding the tissue FISH results as a reference, 10 patients had MYCN-amplified (MNA) NB, and 95 had non-MNA NB. The M/N ratio of the MNA group (median 2.56, range 1.01-3.58) was significantly higher than that of the non-MNA group (median 0.97, range 0.67-5.18) (P < 0.001). In the receiver operating characteristic curve analysis, the area under the curve was 0.957 (95% confidence interval 0.898–1.000; P < 0.001), and it showed 90.9% sensitivity and 97.9% specificity with the selected cut-off value set as 1.6. The detection of MYCN amplification using conventional PCR analysis of serum samples seems to be a simple and promising method to evaluate the MYCN status of NB patients. Further study with a larger set of patients is needed to confirm the accuracy of this result. The Korean Academy of Medical Sciences 2016-09 2016-06-17 /pmc/articles/PMC4974179/ /pubmed/27510381 http://dx.doi.org/10.3346/jkms.2016.31.9.1392 Text en © 2016 The Korean Academy of Medical Sciences. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Ma, Youngeun Lee, Ji Won Park, Soo Jin Yi, Eun Sang Choi, Young Bae Yoo, Keon Hee Sung, Ki Woong Koo, Hong Hoe Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title | Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title_full | Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title_fullStr | Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title_full_unstemmed | Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title_short | Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction |
title_sort | detection of mycn amplification in serum dna using conventional polymerase chain reaction |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974179/ https://www.ncbi.nlm.nih.gov/pubmed/27510381 http://dx.doi.org/10.3346/jkms.2016.31.9.1392 |
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