Cargando…

Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction

Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and...

Descripción completa

Detalles Bibliográficos
Autores principales: Ma, Youngeun, Lee, Ji Won, Park, Soo Jin, Yi, Eun Sang, Choi, Young Bae, Yoo, Keon Hee, Sung, Ki Woong, Koo, Hong Hoe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Academy of Medical Sciences 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974179/
https://www.ncbi.nlm.nih.gov/pubmed/27510381
http://dx.doi.org/10.3346/jkms.2016.31.9.1392
_version_ 1782446506710663168
author Ma, Youngeun
Lee, Ji Won
Park, Soo Jin
Yi, Eun Sang
Choi, Young Bae
Yoo, Keon Hee
Sung, Ki Woong
Koo, Hong Hoe
author_facet Ma, Youngeun
Lee, Ji Won
Park, Soo Jin
Yi, Eun Sang
Choi, Young Bae
Yoo, Keon Hee
Sung, Ki Woong
Koo, Hong Hoe
author_sort Ma, Youngeun
collection PubMed
description Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and invasive procedures are unavoidable. To evaluate the possibility of detecting MYCN amplification without invasive procedure, we performed conventional polymerase chain reaction (PCR) analysis to identify MYCN amplification using the preserved serum DNA. PCR of serum DNA was done in 105 NB patients whose MYCN status had been confirmed by fluorescence in situ hybridization. MYCN amplification was evaluated as the ratio of signal intensities between MYCN and NAGK (M/N ratio). When regarding the tissue FISH results as a reference, 10 patients had MYCN-amplified (MNA) NB, and 95 had non-MNA NB. The M/N ratio of the MNA group (median 2.56, range 1.01-3.58) was significantly higher than that of the non-MNA group (median 0.97, range 0.67-5.18) (P < 0.001). In the receiver operating characteristic curve analysis, the area under the curve was 0.957 (95% confidence interval 0.898–1.000; P < 0.001), and it showed 90.9% sensitivity and 97.9% specificity with the selected cut-off value set as 1.6. The detection of MYCN amplification using conventional PCR analysis of serum samples seems to be a simple and promising method to evaluate the MYCN status of NB patients. Further study with a larger set of patients is needed to confirm the accuracy of this result.
format Online
Article
Text
id pubmed-4974179
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher The Korean Academy of Medical Sciences
record_format MEDLINE/PubMed
spelling pubmed-49741792016-09-01 Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction Ma, Youngeun Lee, Ji Won Park, Soo Jin Yi, Eun Sang Choi, Young Bae Yoo, Keon Hee Sung, Ki Woong Koo, Hong Hoe J Korean Med Sci Original Article Neuroblastoma (NB) is the most common extra-cranial solid tumor of childhood and is characterized by a wide range of clinical behaviors. Amplification of MYCN is a well-known poor prognostic factor in NB patients. As the MYCN amplification status is usually tested using tumor specimens, lengthy and invasive procedures are unavoidable. To evaluate the possibility of detecting MYCN amplification without invasive procedure, we performed conventional polymerase chain reaction (PCR) analysis to identify MYCN amplification using the preserved serum DNA. PCR of serum DNA was done in 105 NB patients whose MYCN status had been confirmed by fluorescence in situ hybridization. MYCN amplification was evaluated as the ratio of signal intensities between MYCN and NAGK (M/N ratio). When regarding the tissue FISH results as a reference, 10 patients had MYCN-amplified (MNA) NB, and 95 had non-MNA NB. The M/N ratio of the MNA group (median 2.56, range 1.01-3.58) was significantly higher than that of the non-MNA group (median 0.97, range 0.67-5.18) (P < 0.001). In the receiver operating characteristic curve analysis, the area under the curve was 0.957 (95% confidence interval 0.898–1.000; P < 0.001), and it showed 90.9% sensitivity and 97.9% specificity with the selected cut-off value set as 1.6. The detection of MYCN amplification using conventional PCR analysis of serum samples seems to be a simple and promising method to evaluate the MYCN status of NB patients. Further study with a larger set of patients is needed to confirm the accuracy of this result. The Korean Academy of Medical Sciences 2016-09 2016-06-17 /pmc/articles/PMC4974179/ /pubmed/27510381 http://dx.doi.org/10.3346/jkms.2016.31.9.1392 Text en © 2016 The Korean Academy of Medical Sciences. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Ma, Youngeun
Lee, Ji Won
Park, Soo Jin
Yi, Eun Sang
Choi, Young Bae
Yoo, Keon Hee
Sung, Ki Woong
Koo, Hong Hoe
Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title_full Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title_fullStr Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title_full_unstemmed Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title_short Detection of MYCN Amplification in Serum DNA Using Conventional Polymerase Chain Reaction
title_sort detection of mycn amplification in serum dna using conventional polymerase chain reaction
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974179/
https://www.ncbi.nlm.nih.gov/pubmed/27510381
http://dx.doi.org/10.3346/jkms.2016.31.9.1392
work_keys_str_mv AT mayoungeun detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT leejiwon detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT parksoojin detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT yieunsang detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT choiyoungbae detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT yookeonhee detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT sungkiwoong detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction
AT koohonghoe detectionofmycnamplificationinserumdnausingconventionalpolymerasechainreaction