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Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra

The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting....

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Detalles Bibliográficos
Autores principales: Wu, Qinglin, Coggins, Brian E., Zhou, Pei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974455/
https://www.ncbi.nlm.nih.gov/pubmed/27459896
http://dx.doi.org/10.1038/ncomms12281
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author Wu, Qinglin
Coggins, Brian E.
Zhou, Pei
author_facet Wu, Qinglin
Coggins, Brian E.
Zhou, Pei
author_sort Wu, Qinglin
collection PubMed
description The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting. While [Image: see text] and [Image: see text] can be used jointly for methods that do not enforce exact agreement between the back-calculated time domain and the original sparse data, the cross-validation measure [Image: see text] is applicable to all reconstruction algorithms. We show that the fidelity of reconstruction is sensitive to changes in [Image: see text] and that model overfitting results in elevated [Image: see text] and reduced spectral quality.
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spelling pubmed-49744552016-08-18 Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra Wu, Qinglin Coggins, Brian E. Zhou, Pei Nat Commun Article The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting. While [Image: see text] and [Image: see text] can be used jointly for methods that do not enforce exact agreement between the back-calculated time domain and the original sparse data, the cross-validation measure [Image: see text] is applicable to all reconstruction algorithms. We show that the fidelity of reconstruction is sensitive to changes in [Image: see text] and that model overfitting results in elevated [Image: see text] and reduced spectral quality. Nature Publishing Group 2016-07-27 /pmc/articles/PMC4974455/ /pubmed/27459896 http://dx.doi.org/10.1038/ncomms12281 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Wu, Qinglin
Coggins, Brian E.
Zhou, Pei
Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title_full Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title_fullStr Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title_full_unstemmed Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title_short Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
title_sort unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974455/
https://www.ncbi.nlm.nih.gov/pubmed/27459896
http://dx.doi.org/10.1038/ncomms12281
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