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Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra
The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974455/ https://www.ncbi.nlm.nih.gov/pubmed/27459896 http://dx.doi.org/10.1038/ncomms12281 |
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author | Wu, Qinglin Coggins, Brian E. Zhou, Pei |
author_facet | Wu, Qinglin Coggins, Brian E. Zhou, Pei |
author_sort | Wu, Qinglin |
collection | PubMed |
description | The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting. While [Image: see text] and [Image: see text] can be used jointly for methods that do not enforce exact agreement between the back-calculated time domain and the original sparse data, the cross-validation measure [Image: see text] is applicable to all reconstruction algorithms. We show that the fidelity of reconstruction is sensitive to changes in [Image: see text] and that model overfitting results in elevated [Image: see text] and reduced spectral quality. |
format | Online Article Text |
id | pubmed-4974455 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49744552016-08-18 Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra Wu, Qinglin Coggins, Brian E. Zhou, Pei Nat Commun Article The application of sparse-sampling techniques to NMR data acquisition would benefit from reliable quality measurements for reconstructed spectra. We introduce a pair of noise-normalized measurements, [Image: see text] and [Image: see text], for differentiating inadequate modelling from overfitting. While [Image: see text] and [Image: see text] can be used jointly for methods that do not enforce exact agreement between the back-calculated time domain and the original sparse data, the cross-validation measure [Image: see text] is applicable to all reconstruction algorithms. We show that the fidelity of reconstruction is sensitive to changes in [Image: see text] and that model overfitting results in elevated [Image: see text] and reduced spectral quality. Nature Publishing Group 2016-07-27 /pmc/articles/PMC4974455/ /pubmed/27459896 http://dx.doi.org/10.1038/ncomms12281 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Wu, Qinglin Coggins, Brian E. Zhou, Pei Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title | Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title_full | Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title_fullStr | Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title_full_unstemmed | Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title_short | Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
title_sort | unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974455/ https://www.ncbi.nlm.nih.gov/pubmed/27459896 http://dx.doi.org/10.1038/ncomms12281 |
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