Cargando…

A Sequence-Independent Strategy for Amplification and Characterisation of Episomal Badnavirus Sequences Reveals Three Previously Uncharacterised Yam Badnaviruses

Yam (Dioscorea spp.) plants are potentially hosts to a diverse range of badnavirus species (genus Badnavirus, family Caulimoviridae), but their detection is complicated by the existence of integrated badnavirus sequences in some yam genomes. To date, only two badnavirus genomes have been characteris...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bömer, Moritz, Turaki, Aliyu A., Silva, Gonçalo, Kumar, P. Lava, Seal, Susan E.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974523/ https://www.ncbi.nlm.nih.gov/pubmed/27399761 http://dx.doi.org/10.3390/v8070188

Ejemplares similares

PCR-DGGE Analysis: Unravelling Complex Mixtures of Badnavirus Sequences Present in Yam Germplasm
por: Turaki, Aliyu A., et al.
Publicado: (2017)

Homing in on Endogenous Badnaviral Elements: Development of Multiplex PCR-DGGE for Detection and Rapid Identification of Badnavirus Sequences in Yam Germplasm
por: Silva, Gonçalo, et al.
Publicado: (2022)

Complete genome sequence of a new member of the genus Badnavirus, Dioscorea bacilliform RT virus 3, reveals the first evidence of recombination in yam badnaviruses
por: Bömer, Moritz, et al.
Publicado: (2017)

Badnaviruses: The Current Global Scenario
por: Bhat, Alangar Ishwara, et al.
Publicado: (2016)

Emerging and Re-Emerging Diseases Caused by Badnaviruses
por: Ishwara Bhat, Alangar, et al.
Publicado: (2023)

Detection and analysis of endogenous badnaviruses in the New Zealand flora
por: Lyttle, David J., et al.
Publicado: (2011)

Badnaviruses of Sweet Potato: Symptomless Coinhabitants on a Global Scale
por: Kreuze, Jan F., et al.
Publicado: (2020)

Grapevine Badnavirus 1: Detection, Genetic Diversity, and Distribution in Croatia
por: Jagunić, Martin, et al.
Publicado: (2022)

Biology and Ultrastructural Characterization of Grapevine Badnavirus 1 and Grapevine Virus G
por: Jagunić, Martin, et al.
Publicado: (2022)

Characterization by Small RNA Sequencing of Taro Bacilliform CH Virus (TaBCHV), a Novel Badnavirus
por: Kazmi, Syeda Amber, et al.
Publicado: (2015)

Bioinformatic, genetic and molecular analysis of several badnavirus sequences integrated in the genomes of diverse cocoa (Theobroma cacao L.) germplasm
por: Ullah, Ihsan, et al.
Publicado: (2023)

Badnaviruses and banana genomes: a long association sheds light on Musa phylogeny and origin
por: Chabannes, Matthieu, et al.
Publicado: (2020)

Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses()
por: Bömer, Moritz, et al.
Publicado: (2019)

A novel badnavirus discovered from Betula sp. affected by birch leaf-roll disease
por: Rumbou, Artemis, et al.
Publicado: (2018)

Characterization of Divergent Grapevine Badnavirus 1 Isolates Found on Different Fig Species (Ficus spp.)
por: Chirkov, Sergei, et al.
Publicado: (2022)

The proposed new species, cacao red vein virus, and three previously recognized badnavirus species are associated with cacao swollen shoot disease
por: Chingandu, Nomatter, et al.
Publicado: (2017)

Assessment of Yam mild mosaic virus coat protein gene sequence diversity reveals the prevalence of cosmopolitan and African group of isolates in Ghana and Nigeria
por: Nkere, Chukwuemeka K., et al.
Publicado: (2020)

Molecular Characterization of a New Virus Species Identified in Yam (Dioscorea spp.) by High-Throughput Sequencing
por: Silva, Gonçalo, et al.
Publicado: (2019)

Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP)
por: Nkere, Chukwuemeka K., et al.
Publicado: (2018)

Correction: A novel badnavirus discovered from Betula sp. affected by birch leaf-roll disease
Publicado: (2018)

Development of Quantitative Real-Time PCR Assays for Rapid and Sensitive Detection of Two Badnavirus Species in Sugarcane
por: Sun, Sheng-Ren, et al.
Publicado: (2018)

A Complex of Badnavirus Species Infecting Cacao Reveals Mixed Infections, Extensive Genomic Variability, and Interspecific Recombination
por: Ramos-Sobrinho, Roberto, et al.
Publicado: (2020)

Transcriptome Analysis Reveals a Comprehensive Virus Resistance Response Mechanism in Pecan Infected by a Novel Badnavirus Pecan Virus
por: Zhang, Jiyu, et al.
Publicado: (2022)

Identification of a New Badnavirus in the Chinaberry (Melia azedarach) Tree and Establishment of a LAMP-LFD Assay for Its Rapid and Visual Detection
por: Lu, Huixin, et al.
Publicado: (2021)

Improved Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) for the Rapid and Sensitive Detection of Yam mosaic virus
por: Festus, Ruth O., et al.
Publicado: (2023)

Revealing the uncharacterised diversity of amphibian and reptile viruses
por: Harding, Emma F., et al.
Publicado: (2022)

Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque
por: Comoy, Emmanuel E., et al.
Publicado: (2017)

Rapid detection of potyviruses from crude plant extracts
por: Silva, Gonçalo, et al.
Publicado: (2018)

Morphological and molecular characterisation of Scutellonema species from yam (Dioscorea spp.) and a key to the species of the genus
por: Kolombia, Yao A., et al.
Publicado: (2017)

Tritagonist as a new term for uncharacterised microorganisms in environmental systems
por: Freimoser, Florian M, et al.
Publicado: (2016)

Provably-secure quantum randomness expansion with uncharacterised homodyne detection
por: Wang, Chao, et al.
Publicado: (2023)

Inspecting the potential physiological and biomedical value of 44 conserved uncharacterised proteins of Streptococcus pneumoniae
por: Martín-Galiano, Antonio J, et al.
Publicado: (2014)

Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle
por: McCabe, Matthew Sean, et al.
Publicado: (2015)

Bacterial episomes and plasmids;
Publicado: (1969)

Refinement of the Diatom Episome Maintenance Sequence and Improvement of Conjugation-Based DNA Delivery Methods
por: Diner, Rachel E., et al.
Publicado: (2016)

Yam
por: Rueda, Jesús 1961-
Publicado: (1987)

Viruses of Yams (Dioscorea spp.): Current Gaps in Knowledge and Future Research Directions to Improve Disease Management
por: Diouf, Mame Boucar, et al.
Publicado: (2022)

Isolation and purification of HIV-1 LTR circles from PBMCs for the analysis of episomal env sequences
por: González, Sandra, et al.
Publicado: (2006)

Topoisomerase Inhibitors Increase Episomal DNA Expression by Inducing the Integration of Episomal DNA in Hepatic Cells
por: Gómez-Moreno, Andoni, et al.
Publicado: (2023)

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
por: Tamiru, Muluneh, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_ubevvu1ipi01llo2nb6csu1sf5