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Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction
The practical use of solid-state nanopores for DNA sequencing requires easy fabrication of the nanopores, reduction of the DNA movement speed and reduction of the ionic current noise. Here, we report an integrated nanopore platform with a nanobead structure that decelerates DNA movement and an insul...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4976334/ https://www.ncbi.nlm.nih.gov/pubmed/27499264 http://dx.doi.org/10.1038/srep31324 |
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author | Goto, Yusuke Yanagi, Itaru Matsui, Kazuma Yokoi, Takahide Takeda, Ken-ichi |
author_facet | Goto, Yusuke Yanagi, Itaru Matsui, Kazuma Yokoi, Takahide Takeda, Ken-ichi |
author_sort | Goto, Yusuke |
collection | PubMed |
description | The practical use of solid-state nanopores for DNA sequencing requires easy fabrication of the nanopores, reduction of the DNA movement speed and reduction of the ionic current noise. Here, we report an integrated nanopore platform with a nanobead structure that decelerates DNA movement and an insulating polyimide layer that reduces noise. To enable rapid nanopore fabrication, we introduced a controlled dielectric breakdown (CDB) process into our system. DNA translocation experiments revealed that single nanopores were created by the CDB process without sacrificing performance in reducing DNA movement speed by up to 10 μs/base or reducing noise up to 600 pA(rms) at 1 MHz. Our platform provides the essential components for proceeding to the next step in the process of DNA sequencing. |
format | Online Article Text |
id | pubmed-4976334 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49763342016-08-22 Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction Goto, Yusuke Yanagi, Itaru Matsui, Kazuma Yokoi, Takahide Takeda, Ken-ichi Sci Rep Article The practical use of solid-state nanopores for DNA sequencing requires easy fabrication of the nanopores, reduction of the DNA movement speed and reduction of the ionic current noise. Here, we report an integrated nanopore platform with a nanobead structure that decelerates DNA movement and an insulating polyimide layer that reduces noise. To enable rapid nanopore fabrication, we introduced a controlled dielectric breakdown (CDB) process into our system. DNA translocation experiments revealed that single nanopores were created by the CDB process without sacrificing performance in reducing DNA movement speed by up to 10 μs/base or reducing noise up to 600 pA(rms) at 1 MHz. Our platform provides the essential components for proceeding to the next step in the process of DNA sequencing. Nature Publishing Group 2016-08-08 /pmc/articles/PMC4976334/ /pubmed/27499264 http://dx.doi.org/10.1038/srep31324 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Goto, Yusuke Yanagi, Itaru Matsui, Kazuma Yokoi, Takahide Takeda, Ken-ichi Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title | Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title_full | Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title_fullStr | Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title_full_unstemmed | Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title_short | Integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, DNA-speed deceleration and noise reduction |
title_sort | integrated solid-state nanopore platform for nanopore fabrication via dielectric breakdown, dna-speed deceleration and noise reduction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4976334/ https://www.ncbi.nlm.nih.gov/pubmed/27499264 http://dx.doi.org/10.1038/srep31324 |
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