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MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments
Stretch-attend posture (SAP) occurs during risk assessment and is prevalent in common rodent behavioral tests. Measuring this behavior can enhance behavioral tests. For example, stretch-attend posture is a more sensitive measure of the effects of anxiolytics than traditional spatiotemporal indices....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4977506/ https://www.ncbi.nlm.nih.gov/pubmed/27503239 http://dx.doi.org/10.1038/srep31286 |
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author | Holly, Kevin S. Orndorff, Casey O. Murray, Teresa A. |
author_facet | Holly, Kevin S. Orndorff, Casey O. Murray, Teresa A. |
author_sort | Holly, Kevin S. |
collection | PubMed |
description | Stretch-attend posture (SAP) occurs during risk assessment and is prevalent in common rodent behavioral tests. Measuring this behavior can enhance behavioral tests. For example, stretch-attend posture is a more sensitive measure of the effects of anxiolytics than traditional spatiotemporal indices. However, quantifying stretch-attend posture using human observers is time consuming, somewhat subjective, and prone to errors. We have developed MATLAB-based software, MATSAP, which is a quick, consistent, and open source program that provides objective automated analysis of stretch-attend posture in rodent behavioral experiments. Unlike human observers, MATSAP is not susceptible to fatigue or subjectivity. We assessed MATSAP performance with videos of male Swiss mice moving in an open field box and in an elevated plus maze. MATSAP reliably detected stretch-attend posture on par with human observers. This freely-available program can be broadly used by biologists and psychologists to accelerate neurological, pharmacological, and behavioral studies. |
format | Online Article Text |
id | pubmed-4977506 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49775062016-08-22 MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments Holly, Kevin S. Orndorff, Casey O. Murray, Teresa A. Sci Rep Article Stretch-attend posture (SAP) occurs during risk assessment and is prevalent in common rodent behavioral tests. Measuring this behavior can enhance behavioral tests. For example, stretch-attend posture is a more sensitive measure of the effects of anxiolytics than traditional spatiotemporal indices. However, quantifying stretch-attend posture using human observers is time consuming, somewhat subjective, and prone to errors. We have developed MATLAB-based software, MATSAP, which is a quick, consistent, and open source program that provides objective automated analysis of stretch-attend posture in rodent behavioral experiments. Unlike human observers, MATSAP is not susceptible to fatigue or subjectivity. We assessed MATSAP performance with videos of male Swiss mice moving in an open field box and in an elevated plus maze. MATSAP reliably detected stretch-attend posture on par with human observers. This freely-available program can be broadly used by biologists and psychologists to accelerate neurological, pharmacological, and behavioral studies. Nature Publishing Group 2016-08-09 /pmc/articles/PMC4977506/ /pubmed/27503239 http://dx.doi.org/10.1038/srep31286 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Holly, Kevin S. Orndorff, Casey O. Murray, Teresa A. MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title | MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title_full | MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title_fullStr | MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title_full_unstemmed | MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title_short | MATSAP: An automated analysis of stretch-attend posture in rodent behavioral experiments |
title_sort | matsap: an automated analysis of stretch-attend posture in rodent behavioral experiments |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4977506/ https://www.ncbi.nlm.nih.gov/pubmed/27503239 http://dx.doi.org/10.1038/srep31286 |
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