Cargando…
An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes
BACKGROUND: Phylogenetic footprinting is an important computational technique for identifying cis-regulatory motifs in orthologous regulatory regions from multiple genomes, as motifs tend to evolve slower than their surrounding non-functional sequences. Its application, however, has several difficul...
Autores principales: | Liu, Bingqiang, Zhang, Hanyuan, Zhou, Chuan, Li, Guojun, Fennell, Anne, Wang, Guanghui, Kang, Yu, Liu, Qi, Ma, Qin |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4977642/ https://www.ncbi.nlm.nih.gov/pubmed/27507169 http://dx.doi.org/10.1186/s12864-016-2982-x |
Ejemplares similares
-
A new framework for identifying cis-regulatory motifs in prokaryotes
por: Li, Guojun, et al.
Publicado: (2011) -
Accurate recognition of cis-regulatory motifs with the correct lengths in prokaryotic genomes
por: Li, Guojun, et al.
Publicado: (2010) -
Bacterial regulon modeling and prediction based on systematic cis regulatory motif analyses
por: Liu, Bingqiang, et al.
Publicado: (2016) -
Using hexamers to predict cis-regulatory motifs in Drosophila
por: Chan, Bob Y, et al.
Publicado: (2005) -
DMINDA: an integrated web server for DNA motif identification and
analyses
por: Ma, Qin, et al.
Publicado: (2014)