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Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma
Accumulated evidence indicates that various types of miRNA are aberrantly expressed in lung cancer and secreted into the bloodstream. For this study, we constructed a serum diagnostic classifier based on detailed bioinformatics analysis of miRNA profiles from a training cohort of 143 lung adenocarci...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4979017/ https://www.ncbi.nlm.nih.gov/pubmed/27507195 http://dx.doi.org/10.1038/srep31389 |
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author | Tai, Mei Chee Yanagisawa, Kiyoshi Nakatochi, Masahiro Hotta, Naoe Hosono, Yasuyuki Kawaguchi, Koji Naito, Mariko Taniguchi, Hiroyuki Wakai, Kenji Yokoi, Kohei Takahashi, Takashi |
author_facet | Tai, Mei Chee Yanagisawa, Kiyoshi Nakatochi, Masahiro Hotta, Naoe Hosono, Yasuyuki Kawaguchi, Koji Naito, Mariko Taniguchi, Hiroyuki Wakai, Kenji Yokoi, Kohei Takahashi, Takashi |
author_sort | Tai, Mei Chee |
collection | PubMed |
description | Accumulated evidence indicates that various types of miRNA are aberrantly expressed in lung cancer and secreted into the bloodstream. For this study, we constructed a serum diagnostic classifier based on detailed bioinformatics analysis of miRNA profiles from a training cohort of 143 lung adenocarcinoma patients and 49 healthy subjects, resulting in a 20 miRNA-based classifier. Validation performed with an independent cohort of samples from lung adenocarcinoma patients (n = 110), healthy subjects (n = 52), and benign pulmonary disease patients (n = 47) showed a sensitivity of 89.1% and specificity of 94.9%, with an area under the curve value of 0.958. Notably, 90.8% of Stage I lung adenocarcinoma cases were correctly diagnosed. Interestingly, this classifier also detected squamous and large cell lung carcinoma cases at relatively high rates (70.4% and 70.0%, respectively), which appears to be consistent with organ site-dependent miRNA expression in cancer tissues. In contrast, we observed significantly lower rates (0–35%) using samples from 96 cases of cancer in other major organs, with breast cancer the lowest. These findings warrant a future study to realize its clinical application as a part of diagnostic procedures for lung cancers, for which early detection and surgical removal is presently the only hope for eventual cure. |
format | Online Article Text |
id | pubmed-4979017 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49790172016-08-19 Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma Tai, Mei Chee Yanagisawa, Kiyoshi Nakatochi, Masahiro Hotta, Naoe Hosono, Yasuyuki Kawaguchi, Koji Naito, Mariko Taniguchi, Hiroyuki Wakai, Kenji Yokoi, Kohei Takahashi, Takashi Sci Rep Article Accumulated evidence indicates that various types of miRNA are aberrantly expressed in lung cancer and secreted into the bloodstream. For this study, we constructed a serum diagnostic classifier based on detailed bioinformatics analysis of miRNA profiles from a training cohort of 143 lung adenocarcinoma patients and 49 healthy subjects, resulting in a 20 miRNA-based classifier. Validation performed with an independent cohort of samples from lung adenocarcinoma patients (n = 110), healthy subjects (n = 52), and benign pulmonary disease patients (n = 47) showed a sensitivity of 89.1% and specificity of 94.9%, with an area under the curve value of 0.958. Notably, 90.8% of Stage I lung adenocarcinoma cases were correctly diagnosed. Interestingly, this classifier also detected squamous and large cell lung carcinoma cases at relatively high rates (70.4% and 70.0%, respectively), which appears to be consistent with organ site-dependent miRNA expression in cancer tissues. In contrast, we observed significantly lower rates (0–35%) using samples from 96 cases of cancer in other major organs, with breast cancer the lowest. These findings warrant a future study to realize its clinical application as a part of diagnostic procedures for lung cancers, for which early detection and surgical removal is presently the only hope for eventual cure. Nature Publishing Group 2016-08-10 /pmc/articles/PMC4979017/ /pubmed/27507195 http://dx.doi.org/10.1038/srep31389 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Tai, Mei Chee Yanagisawa, Kiyoshi Nakatochi, Masahiro Hotta, Naoe Hosono, Yasuyuki Kawaguchi, Koji Naito, Mariko Taniguchi, Hiroyuki Wakai, Kenji Yokoi, Kohei Takahashi, Takashi Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title | Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title_full | Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title_fullStr | Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title_full_unstemmed | Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title_short | Blood-borne miRNA profile-based diagnostic classifier for lung adenocarcinoma |
title_sort | blood-borne mirna profile-based diagnostic classifier for lung adenocarcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4979017/ https://www.ncbi.nlm.nih.gov/pubmed/27507195 http://dx.doi.org/10.1038/srep31389 |
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