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Systems Level Analysis of the Yeast Osmo-Stat
Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981887/ https://www.ncbi.nlm.nih.gov/pubmed/27515486 http://dx.doi.org/10.1038/srep30950 |
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author | Talemi, Soheil Rastgou Tiger, Carl-Fredrik Andersson, Mikael Babazadeh, Roja Welkenhuysen, Niek Klipp, Edda Hohmann, Stefan Schaber, Jörg |
author_facet | Talemi, Soheil Rastgou Tiger, Carl-Fredrik Andersson, Mikael Babazadeh, Roja Welkenhuysen, Niek Klipp, Edda Hohmann, Stefan Schaber, Jörg |
author_sort | Talemi, Soheil Rastgou |
collection | PubMed |
description | Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response to multiple simultaneous stimuli, a phenomenon called crosstalk. Here, we investigate possible mechanisms of crosstalk between the High Osmolarity Glycerol (HOG) and the Cell Wall Integrity (CWI) pathways in yeast, which mediate adaptation to hyper- and hypo-osmotic challenges, respectively. We combine ensemble modeling with experimental investigations to test in quantitative terms different hypotheses about the crosstalk of the HOG and the CWI pathways. Our analyses indicate that for the conditions studied i) the CWI pathway activation employs an adaptive mechanism with a variable volume-dependent threshold, in contrast to the HOG pathway, whose activation relies on a fixed volume-dependent threshold, ii) there is no or little direct crosstalk between the HOG and CWI pathways, and iii) its mainly the HOG alone mediating adaptation of cellular osmotic pressure for both hyper- as well as hypo-osmotic stress. Thus, by iteratively combining mathematical modeling with experimentation we achieved a better understanding of regulatory mechanisms of yeast osmo-homeostasis and formulated new hypotheses about osmo-sensing. |
format | Online Article Text |
id | pubmed-4981887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49818872016-08-19 Systems Level Analysis of the Yeast Osmo-Stat Talemi, Soheil Rastgou Tiger, Carl-Fredrik Andersson, Mikael Babazadeh, Roja Welkenhuysen, Niek Klipp, Edda Hohmann, Stefan Schaber, Jörg Sci Rep Article Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response to multiple simultaneous stimuli, a phenomenon called crosstalk. Here, we investigate possible mechanisms of crosstalk between the High Osmolarity Glycerol (HOG) and the Cell Wall Integrity (CWI) pathways in yeast, which mediate adaptation to hyper- and hypo-osmotic challenges, respectively. We combine ensemble modeling with experimental investigations to test in quantitative terms different hypotheses about the crosstalk of the HOG and the CWI pathways. Our analyses indicate that for the conditions studied i) the CWI pathway activation employs an adaptive mechanism with a variable volume-dependent threshold, in contrast to the HOG pathway, whose activation relies on a fixed volume-dependent threshold, ii) there is no or little direct crosstalk between the HOG and CWI pathways, and iii) its mainly the HOG alone mediating adaptation of cellular osmotic pressure for both hyper- as well as hypo-osmotic stress. Thus, by iteratively combining mathematical modeling with experimentation we achieved a better understanding of regulatory mechanisms of yeast osmo-homeostasis and formulated new hypotheses about osmo-sensing. Nature Publishing Group 2016-08-12 /pmc/articles/PMC4981887/ /pubmed/27515486 http://dx.doi.org/10.1038/srep30950 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Talemi, Soheil Rastgou Tiger, Carl-Fredrik Andersson, Mikael Babazadeh, Roja Welkenhuysen, Niek Klipp, Edda Hohmann, Stefan Schaber, Jörg Systems Level Analysis of the Yeast Osmo-Stat |
title | Systems Level Analysis of the Yeast Osmo-Stat |
title_full | Systems Level Analysis of the Yeast Osmo-Stat |
title_fullStr | Systems Level Analysis of the Yeast Osmo-Stat |
title_full_unstemmed | Systems Level Analysis of the Yeast Osmo-Stat |
title_short | Systems Level Analysis of the Yeast Osmo-Stat |
title_sort | systems level analysis of the yeast osmo-stat |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981887/ https://www.ncbi.nlm.nih.gov/pubmed/27515486 http://dx.doi.org/10.1038/srep30950 |
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