Cargando…

Systems Level Analysis of the Yeast Osmo-Stat

Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response...

Descripción completa

Detalles Bibliográficos
Autores principales: Talemi, Soheil Rastgou, Tiger, Carl-Fredrik, Andersson, Mikael, Babazadeh, Roja, Welkenhuysen, Niek, Klipp, Edda, Hohmann, Stefan, Schaber, Jörg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981887/
https://www.ncbi.nlm.nih.gov/pubmed/27515486
http://dx.doi.org/10.1038/srep30950
_version_ 1782447669212348416
author Talemi, Soheil Rastgou
Tiger, Carl-Fredrik
Andersson, Mikael
Babazadeh, Roja
Welkenhuysen, Niek
Klipp, Edda
Hohmann, Stefan
Schaber, Jörg
author_facet Talemi, Soheil Rastgou
Tiger, Carl-Fredrik
Andersson, Mikael
Babazadeh, Roja
Welkenhuysen, Niek
Klipp, Edda
Hohmann, Stefan
Schaber, Jörg
author_sort Talemi, Soheil Rastgou
collection PubMed
description Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response to multiple simultaneous stimuli, a phenomenon called crosstalk. Here, we investigate possible mechanisms of crosstalk between the High Osmolarity Glycerol (HOG) and the Cell Wall Integrity (CWI) pathways in yeast, which mediate adaptation to hyper- and hypo-osmotic challenges, respectively. We combine ensemble modeling with experimental investigations to test in quantitative terms different hypotheses about the crosstalk of the HOG and the CWI pathways. Our analyses indicate that for the conditions studied i) the CWI pathway activation employs an adaptive mechanism with a variable volume-dependent threshold, in contrast to the HOG pathway, whose activation relies on a fixed volume-dependent threshold, ii) there is no or little direct crosstalk between the HOG and CWI pathways, and iii) its mainly the HOG alone mediating adaptation of cellular osmotic pressure for both hyper- as well as hypo-osmotic stress. Thus, by iteratively combining mathematical modeling with experimentation we achieved a better understanding of regulatory mechanisms of yeast osmo-homeostasis and formulated new hypotheses about osmo-sensing.
format Online
Article
Text
id pubmed-4981887
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-49818872016-08-19 Systems Level Analysis of the Yeast Osmo-Stat Talemi, Soheil Rastgou Tiger, Carl-Fredrik Andersson, Mikael Babazadeh, Roja Welkenhuysen, Niek Klipp, Edda Hohmann, Stefan Schaber, Jörg Sci Rep Article Adaptation is an important property of living organisms enabling them to cope with environmental stress and maintaining homeostasis. Adaptation is mediated by signaling pathways responding to different stimuli. Those signaling pathways might communicate in order to orchestrate the cellular response to multiple simultaneous stimuli, a phenomenon called crosstalk. Here, we investigate possible mechanisms of crosstalk between the High Osmolarity Glycerol (HOG) and the Cell Wall Integrity (CWI) pathways in yeast, which mediate adaptation to hyper- and hypo-osmotic challenges, respectively. We combine ensemble modeling with experimental investigations to test in quantitative terms different hypotheses about the crosstalk of the HOG and the CWI pathways. Our analyses indicate that for the conditions studied i) the CWI pathway activation employs an adaptive mechanism with a variable volume-dependent threshold, in contrast to the HOG pathway, whose activation relies on a fixed volume-dependent threshold, ii) there is no or little direct crosstalk between the HOG and CWI pathways, and iii) its mainly the HOG alone mediating adaptation of cellular osmotic pressure for both hyper- as well as hypo-osmotic stress. Thus, by iteratively combining mathematical modeling with experimentation we achieved a better understanding of regulatory mechanisms of yeast osmo-homeostasis and formulated new hypotheses about osmo-sensing. Nature Publishing Group 2016-08-12 /pmc/articles/PMC4981887/ /pubmed/27515486 http://dx.doi.org/10.1038/srep30950 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Talemi, Soheil Rastgou
Tiger, Carl-Fredrik
Andersson, Mikael
Babazadeh, Roja
Welkenhuysen, Niek
Klipp, Edda
Hohmann, Stefan
Schaber, Jörg
Systems Level Analysis of the Yeast Osmo-Stat
title Systems Level Analysis of the Yeast Osmo-Stat
title_full Systems Level Analysis of the Yeast Osmo-Stat
title_fullStr Systems Level Analysis of the Yeast Osmo-Stat
title_full_unstemmed Systems Level Analysis of the Yeast Osmo-Stat
title_short Systems Level Analysis of the Yeast Osmo-Stat
title_sort systems level analysis of the yeast osmo-stat
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981887/
https://www.ncbi.nlm.nih.gov/pubmed/27515486
http://dx.doi.org/10.1038/srep30950
work_keys_str_mv AT talemisoheilrastgou systemslevelanalysisoftheyeastosmostat
AT tigercarlfredrik systemslevelanalysisoftheyeastosmostat
AT anderssonmikael systemslevelanalysisoftheyeastosmostat
AT babazadehroja systemslevelanalysisoftheyeastosmostat
AT welkenhuysenniek systemslevelanalysisoftheyeastosmostat
AT klippedda systemslevelanalysisoftheyeastosmostat
AT hohmannstefan systemslevelanalysisoftheyeastosmostat
AT schaberjorg systemslevelanalysisoftheyeastosmostat