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Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579
This data article reports changes in the cellular and exoproteome of B. cereus cured from pBClin15.Time-course changes of proteins were assessed by high-throughput nanoLC-MS/MS. We report all the peptides and proteins identified and quantified in B. cereus with and without pBClin15. Proteins were cl...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983103/ https://www.ncbi.nlm.nih.gov/pubmed/27547804 http://dx.doi.org/10.1016/j.dib.2016.07.042 |
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author | Madeira, Jean-Paul Alpha-Bazin, Béatrice Armengaud, Jean Omer, Hélène Duport, Catherine |
author_facet | Madeira, Jean-Paul Alpha-Bazin, Béatrice Armengaud, Jean Omer, Hélène Duport, Catherine |
author_sort | Madeira, Jean-Paul |
collection | PubMed |
description | This data article reports changes in the cellular and exoproteome of B. cereus cured from pBClin15.Time-course changes of proteins were assessed by high-throughput nanoLC-MS/MS. We report all the peptides and proteins identified and quantified in B. cereus with and without pBClin15. Proteins were classified into functional groups using the information available in the KEGG classification and we reported their abundance in term of normalized spectral abundance factor. The repertoire of experimentally confirmed proteins of B. cereus presented here is the largest ever reported, and provides new insights into the interplay between pBClin15 and its host B. cereus ATCC 14579. The data reported here is related to a published shotgun proteomics analysis regarding the role of pBClin15, “Deciphering the interactions between the Bacillus cereus linear plasmid, pBClin15, and its host by high-throughput comparative proteomics” Madeira et al. [1]. All the associated mass spectrometry data have been deposited in the ProteomeXchange Consortium (http://proteomecentral.proteomexchange.org) via the PRIDE partner repository (http://www.ebi.ac.uk/pride/), with the dataset identifier PRIDE: PXD001568, PRIDE: PXD002788 and PRIDE: PXD002789. |
format | Online Article Text |
id | pubmed-4983103 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-49831032016-08-19 Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 Madeira, Jean-Paul Alpha-Bazin, Béatrice Armengaud, Jean Omer, Hélène Duport, Catherine Data Brief Data Article This data article reports changes in the cellular and exoproteome of B. cereus cured from pBClin15.Time-course changes of proteins were assessed by high-throughput nanoLC-MS/MS. We report all the peptides and proteins identified and quantified in B. cereus with and without pBClin15. Proteins were classified into functional groups using the information available in the KEGG classification and we reported their abundance in term of normalized spectral abundance factor. The repertoire of experimentally confirmed proteins of B. cereus presented here is the largest ever reported, and provides new insights into the interplay between pBClin15 and its host B. cereus ATCC 14579. The data reported here is related to a published shotgun proteomics analysis regarding the role of pBClin15, “Deciphering the interactions between the Bacillus cereus linear plasmid, pBClin15, and its host by high-throughput comparative proteomics” Madeira et al. [1]. All the associated mass spectrometry data have been deposited in the ProteomeXchange Consortium (http://proteomecentral.proteomexchange.org) via the PRIDE partner repository (http://www.ebi.ac.uk/pride/), with the dataset identifier PRIDE: PXD001568, PRIDE: PXD002788 and PRIDE: PXD002789. Elsevier 2016-07-26 /pmc/articles/PMC4983103/ /pubmed/27547804 http://dx.doi.org/10.1016/j.dib.2016.07.042 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Madeira, Jean-Paul Alpha-Bazin, Béatrice Armengaud, Jean Omer, Hélène Duport, Catherine Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title | Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title_full | Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title_fullStr | Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title_full_unstemmed | Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title_short | Proteome data to explore the impact of pBClin15 on Bacillus cereus ATCC 14579 |
title_sort | proteome data to explore the impact of pbclin15 on bacillus cereus atcc 14579 |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983103/ https://www.ncbi.nlm.nih.gov/pubmed/27547804 http://dx.doi.org/10.1016/j.dib.2016.07.042 |
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