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Data on the expression of cellular lncRNAs in human adenovirus infected cells
Expression of cellular long non-coding RNAs (lncRNAs) in human primary lung fibroblasts (IMR-90) during the course of adenovirus type 2 (Ad2) infection was studied by strand-specific whole transcriptome sequencing. In total, 645 cellular lncRNAs were expressed at a significant level and 398 of them...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983107/ https://www.ncbi.nlm.nih.gov/pubmed/27547808 http://dx.doi.org/10.1016/j.dib.2016.06.053 |
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author | Chen, Maoshan Zhao, Hongxing Lind, Sara Bergström Pettersson, Ulf |
author_facet | Chen, Maoshan Zhao, Hongxing Lind, Sara Bergström Pettersson, Ulf |
author_sort | Chen, Maoshan |
collection | PubMed |
description | Expression of cellular long non-coding RNAs (lncRNAs) in human primary lung fibroblasts (IMR-90) during the course of adenovirus type 2 (Ad2) infection was studied by strand-specific whole transcriptome sequencing. In total, 645 cellular lncRNAs were expressed at a significant level and 398 of them were changed more than 2-fold. The changes in expression followed a distinct temporal pattern. Significantly, 80% of the changes occurred at the late phase and 80% of the de-regulated lncRNAs were up-regulated. The three largest groups of deregulated lncRNAs were 125 antisense RNAs, 111 pseudogenes and 85 long intergenic non-coding RNAs (lincRNAs). Lastly, more than 36% of lncRNAs have been shown to interact with RNA binding proteins. |
format | Online Article Text |
id | pubmed-4983107 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-49831072016-08-19 Data on the expression of cellular lncRNAs in human adenovirus infected cells Chen, Maoshan Zhao, Hongxing Lind, Sara Bergström Pettersson, Ulf Data Brief Data Article Expression of cellular long non-coding RNAs (lncRNAs) in human primary lung fibroblasts (IMR-90) during the course of adenovirus type 2 (Ad2) infection was studied by strand-specific whole transcriptome sequencing. In total, 645 cellular lncRNAs were expressed at a significant level and 398 of them were changed more than 2-fold. The changes in expression followed a distinct temporal pattern. Significantly, 80% of the changes occurred at the late phase and 80% of the de-regulated lncRNAs were up-regulated. The three largest groups of deregulated lncRNAs were 125 antisense RNAs, 111 pseudogenes and 85 long intergenic non-coding RNAs (lincRNAs). Lastly, more than 36% of lncRNAs have been shown to interact with RNA binding proteins. Elsevier 2016-07-05 /pmc/articles/PMC4983107/ /pubmed/27547808 http://dx.doi.org/10.1016/j.dib.2016.06.053 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Chen, Maoshan Zhao, Hongxing Lind, Sara Bergström Pettersson, Ulf Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title | Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title_full | Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title_fullStr | Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title_full_unstemmed | Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title_short | Data on the expression of cellular lncRNAs in human adenovirus infected cells |
title_sort | data on the expression of cellular lncrnas in human adenovirus infected cells |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983107/ https://www.ncbi.nlm.nih.gov/pubmed/27547808 http://dx.doi.org/10.1016/j.dib.2016.06.053 |
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