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Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein
New experiments dedicated for large IDPs backbone resonance assignment are presented. The most distinctive feature of all described techniques is the employment of MOCCA-XY16 mixing sequences to obtain effective magnetization transfers between carbonyl carbon backbone nuclei. The proposed 4 and 5 di...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983291/ https://www.ncbi.nlm.nih.gov/pubmed/27430223 http://dx.doi.org/10.1007/s10858-016-0048-7 |
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author | Żerko, Szymon Byrski, Piotr Włodarczyk-Pruszyński, Paweł Górka, Michał Ledolter, Karin Masliah, Eliezer Konrat, Robert Koźmiński, Wiktor |
author_facet | Żerko, Szymon Byrski, Piotr Włodarczyk-Pruszyński, Paweł Górka, Michał Ledolter, Karin Masliah, Eliezer Konrat, Robert Koźmiński, Wiktor |
author_sort | Żerko, Szymon |
collection | PubMed |
description | New experiments dedicated for large IDPs backbone resonance assignment are presented. The most distinctive feature of all described techniques is the employment of MOCCA-XY16 mixing sequences to obtain effective magnetization transfers between carbonyl carbon backbone nuclei. The proposed 4 and 5 dimensional experiments provide a high dispersion of obtained signals making them suitable for use in the case of large IDPs (application to 354 a. a. residues of Tau protein 3x isoform is presented) as well as provide both forward and backward connectivities. What is more, connecting short chains interrupted with proline residues is also possible. All the experiments employ non-uniform sampling. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10858-016-0048-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4983291 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-49832912016-08-25 Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein Żerko, Szymon Byrski, Piotr Włodarczyk-Pruszyński, Paweł Górka, Michał Ledolter, Karin Masliah, Eliezer Konrat, Robert Koźmiński, Wiktor J Biomol NMR Article New experiments dedicated for large IDPs backbone resonance assignment are presented. The most distinctive feature of all described techniques is the employment of MOCCA-XY16 mixing sequences to obtain effective magnetization transfers between carbonyl carbon backbone nuclei. The proposed 4 and 5 dimensional experiments provide a high dispersion of obtained signals making them suitable for use in the case of large IDPs (application to 354 a. a. residues of Tau protein 3x isoform is presented) as well as provide both forward and backward connectivities. What is more, connecting short chains interrupted with proline residues is also possible. All the experiments employ non-uniform sampling. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10858-016-0048-7) contains supplementary material, which is available to authorized users. Springer Netherlands 2016-07-18 2016 /pmc/articles/PMC4983291/ /pubmed/27430223 http://dx.doi.org/10.1007/s10858-016-0048-7 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Żerko, Szymon Byrski, Piotr Włodarczyk-Pruszyński, Paweł Górka, Michał Ledolter, Karin Masliah, Eliezer Konrat, Robert Koźmiński, Wiktor Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title | Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title_full | Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title_fullStr | Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title_full_unstemmed | Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title_short | Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein |
title_sort | five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to tau3x protein |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983291/ https://www.ncbi.nlm.nih.gov/pubmed/27430223 http://dx.doi.org/10.1007/s10858-016-0048-7 |
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