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An Optimal Seed Based Compression Algorithm for DNA Sequences

This paper proposes a seed based lossless compression algorithm to compress a DNA sequence which uses a substitution method that is similar to the LempelZiv compression scheme. The proposed method exploits the repetition structures that are inherent in DNA sequences by creating an offline dictionary...

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Detalles Bibliográficos
Autores principales:	Eric, Pamela Vinitha, Gopalakrishnan, Gopakumar, Karunakaran, Muralikrishnan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Hindawi Publishing Corporation 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4983397/ https://www.ncbi.nlm.nih.gov/pubmed/27555868 http://dx.doi.org/10.1155/2016/3528406

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