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3D-Printing for Analytical Ultracentrifugation

Analytical ultracentrifugation (AUC) is a classical technique of physical biochemistry providing information on size, shape, and interactions of macromolecules from the analysis of their migration in centrifugal fields while free in solution. A key mechanical element in AUC is the centerpiece, a com...

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Autores principales: Desai, Abhiksha, Krynitsky, Jonathan, Pohida, Thomas J., Zhao, Huaying, Schuck, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4985148/
https://www.ncbi.nlm.nih.gov/pubmed/27525659
http://dx.doi.org/10.1371/journal.pone.0155201
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author Desai, Abhiksha
Krynitsky, Jonathan
Pohida, Thomas J.
Zhao, Huaying
Schuck, Peter
author_facet Desai, Abhiksha
Krynitsky, Jonathan
Pohida, Thomas J.
Zhao, Huaying
Schuck, Peter
author_sort Desai, Abhiksha
collection PubMed
description Analytical ultracentrifugation (AUC) is a classical technique of physical biochemistry providing information on size, shape, and interactions of macromolecules from the analysis of their migration in centrifugal fields while free in solution. A key mechanical element in AUC is the centerpiece, a component of the sample cell assembly that is mounted between the optical windows to allow imaging and to seal the sample solution column against high vacuum while exposed to gravitational forces in excess of 300,000 g. For sedimentation velocity it needs to be precisely sector-shaped to allow unimpeded radial macromolecular migration. During the history of AUC a great variety of centerpiece designs have been developed for different types of experiments. Here, we report that centerpieces can now be readily fabricated by 3D printing at low cost, from a variety of materials, and with customized designs. The new centerpieces can exhibit sufficient mechanical stability to withstand the gravitational forces at the highest rotor speeds and be sufficiently precise for sedimentation equilibrium and sedimentation velocity experiments. Sedimentation velocity experiments with bovine serum albumin as a reference molecule in 3D printed centerpieces with standard double-sector design result in sedimentation boundaries virtually indistinguishable from those in commercial double-sector epoxy centerpieces, with sedimentation coefficients well within the range of published values. The statistical error of the measurement is slightly above that obtained with commercial epoxy, but still below 1%. Facilitated by modern open-source design and fabrication paradigms, we believe 3D printed centerpieces and AUC accessories can spawn a variety of improvements in AUC experimental design, efficiency and resource allocation.
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spelling pubmed-49851482016-08-29 3D-Printing for Analytical Ultracentrifugation Desai, Abhiksha Krynitsky, Jonathan Pohida, Thomas J. Zhao, Huaying Schuck, Peter PLoS One Research Article Analytical ultracentrifugation (AUC) is a classical technique of physical biochemistry providing information on size, shape, and interactions of macromolecules from the analysis of their migration in centrifugal fields while free in solution. A key mechanical element in AUC is the centerpiece, a component of the sample cell assembly that is mounted between the optical windows to allow imaging and to seal the sample solution column against high vacuum while exposed to gravitational forces in excess of 300,000 g. For sedimentation velocity it needs to be precisely sector-shaped to allow unimpeded radial macromolecular migration. During the history of AUC a great variety of centerpiece designs have been developed for different types of experiments. Here, we report that centerpieces can now be readily fabricated by 3D printing at low cost, from a variety of materials, and with customized designs. The new centerpieces can exhibit sufficient mechanical stability to withstand the gravitational forces at the highest rotor speeds and be sufficiently precise for sedimentation equilibrium and sedimentation velocity experiments. Sedimentation velocity experiments with bovine serum albumin as a reference molecule in 3D printed centerpieces with standard double-sector design result in sedimentation boundaries virtually indistinguishable from those in commercial double-sector epoxy centerpieces, with sedimentation coefficients well within the range of published values. The statistical error of the measurement is slightly above that obtained with commercial epoxy, but still below 1%. Facilitated by modern open-source design and fabrication paradigms, we believe 3D printed centerpieces and AUC accessories can spawn a variety of improvements in AUC experimental design, efficiency and resource allocation. Public Library of Science 2016-08-15 /pmc/articles/PMC4985148/ /pubmed/27525659 http://dx.doi.org/10.1371/journal.pone.0155201 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Desai, Abhiksha
Krynitsky, Jonathan
Pohida, Thomas J.
Zhao, Huaying
Schuck, Peter
3D-Printing for Analytical Ultracentrifugation
title 3D-Printing for Analytical Ultracentrifugation
title_full 3D-Printing for Analytical Ultracentrifugation
title_fullStr 3D-Printing for Analytical Ultracentrifugation
title_full_unstemmed 3D-Printing for Analytical Ultracentrifugation
title_short 3D-Printing for Analytical Ultracentrifugation
title_sort 3d-printing for analytical ultracentrifugation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4985148/
https://www.ncbi.nlm.nih.gov/pubmed/27525659
http://dx.doi.org/10.1371/journal.pone.0155201
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