Cargando…

MoRFchibi SYSTEM: software tools for the identification of MoRFs in protein sequences

Molecular recognition features, MoRFs, are short segments within longer disordered protein regions that bind to globular protein domains in a process known as disorder-to-order transition. MoRFs have been found to play a significant role in signaling and regulatory processes in cells. High-confidenc...

Descripción completa

Detalles Bibliográficos
Autores principales: Malhis, Nawar, Jacobson, Matthew, Gsponer, Jörg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987941/
https://www.ncbi.nlm.nih.gov/pubmed/27174932
http://dx.doi.org/10.1093/nar/gkw409
Descripción
Sumario:Molecular recognition features, MoRFs, are short segments within longer disordered protein regions that bind to globular protein domains in a process known as disorder-to-order transition. MoRFs have been found to play a significant role in signaling and regulatory processes in cells. High-confidence computational identification of MoRFs remains an important challenge. In this work, we introduce MoRFchibi SYSTEM that contains three MoRF predictors: MoRF(CHiBi), a basic predictor best suited as a component in other applications, MoRF(CHiBi_)(Light), ideal for high-throughput predictions and MoRF(CHiBi_)(Web), slower than the other two but best for high accuracy predictions. Results show that MoRFchibi SYSTEM provides more than double the precision of other predictors. MoRFchibi SYSTEM is available in three different forms: as HTML web server, RESTful web server and downloadable software at: http://www.chibi.ubc.ca/faculty/joerg-gsponer/gsponer-lab/software/morf_chibi/