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Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle
Iron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to in...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4988672/ https://www.ncbi.nlm.nih.gov/pubmed/27532424 http://dx.doi.org/10.1371/journal.pone.0161160 |
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author | Diniz, Wellison Jarles da Silva Coutinho, Luiz Lehmann Tizioto, Polyana Cristine Cesar, Aline Silva Mello Gromboni, Caio Fernando Nogueira, Ana Rita Araújo de Oliveira, Priscila Silva Neubern de Souza, Marcela Maria Regitano, Luciana Correia de Almeida |
author_facet | Diniz, Wellison Jarles da Silva Coutinho, Luiz Lehmann Tizioto, Polyana Cristine Cesar, Aline Silva Mello Gromboni, Caio Fernando Nogueira, Ana Rita Araújo de Oliveira, Priscila Silva Neubern de Souza, Marcela Maria Regitano, Luciana Correia de Almeida |
author_sort | Diniz, Wellison Jarles da Silva |
collection | PubMed |
description | Iron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to investigate the likely role of these DE genes in biological processes underlying beef quality parameters. Samples for RNA extraction for sequencing and iron, copper, manganese, and zinc determination were collected from LD muscles at slaughter. Eight Nelore steers, with extreme genomic estimated breeding values for iron content (Fe-GEBV), were selected from a reference population of 373 animals. From the 49 annotated DE genes (FDR<0.05) found between the two groups, 18 were up-regulated and 31 down-regulated for the animals in the low Fe-GEBV group. The functional enrichment analyses identified several biological processes, such as lipid transport and metabolism, and cell growth. Lipid metabolism was the main pathway observed in the analysis of metabolic and canonical signaling pathways for the genes identified as DE, including the genes FASN, FABP4, and THRSP, which are functional candidates for beef quality, suggesting reduced lipogenic activities with lower iron content. Our results indicate metabolic pathways that are partially influenced by iron, contributing to a better understanding of its participation in skeletal muscle physiology. |
format | Online Article Text |
id | pubmed-4988672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-49886722016-08-29 Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle Diniz, Wellison Jarles da Silva Coutinho, Luiz Lehmann Tizioto, Polyana Cristine Cesar, Aline Silva Mello Gromboni, Caio Fernando Nogueira, Ana Rita Araújo de Oliveira, Priscila Silva Neubern de Souza, Marcela Maria Regitano, Luciana Correia de Almeida PLoS One Research Article Iron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to investigate the likely role of these DE genes in biological processes underlying beef quality parameters. Samples for RNA extraction for sequencing and iron, copper, manganese, and zinc determination were collected from LD muscles at slaughter. Eight Nelore steers, with extreme genomic estimated breeding values for iron content (Fe-GEBV), were selected from a reference population of 373 animals. From the 49 annotated DE genes (FDR<0.05) found between the two groups, 18 were up-regulated and 31 down-regulated for the animals in the low Fe-GEBV group. The functional enrichment analyses identified several biological processes, such as lipid transport and metabolism, and cell growth. Lipid metabolism was the main pathway observed in the analysis of metabolic and canonical signaling pathways for the genes identified as DE, including the genes FASN, FABP4, and THRSP, which are functional candidates for beef quality, suggesting reduced lipogenic activities with lower iron content. Our results indicate metabolic pathways that are partially influenced by iron, contributing to a better understanding of its participation in skeletal muscle physiology. Public Library of Science 2016-08-17 /pmc/articles/PMC4988672/ /pubmed/27532424 http://dx.doi.org/10.1371/journal.pone.0161160 Text en © 2016 Diniz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Diniz, Wellison Jarles da Silva Coutinho, Luiz Lehmann Tizioto, Polyana Cristine Cesar, Aline Silva Mello Gromboni, Caio Fernando Nogueira, Ana Rita Araújo de Oliveira, Priscila Silva Neubern de Souza, Marcela Maria Regitano, Luciana Correia de Almeida Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title | Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title_full | Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title_fullStr | Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title_full_unstemmed | Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title_short | Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle |
title_sort | iron content affects lipogenic gene expression in the muscle of nelore beef cattle |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4988672/ https://www.ncbi.nlm.nih.gov/pubmed/27532424 http://dx.doi.org/10.1371/journal.pone.0161160 |
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