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Segmentation in dermatological hyperspectral images: dedicated methods

BACKGROUND: Segmentation of hyperspectral medical images is one of many image segmentation methods which require profiling. This profiling involves either the adjustment of existing, known image segmentation methods or a proposal of new dedicated methods of hyperspectral image segmentation. Taking i...

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Autores principales: Koprowski, Robert, Olczyk, Paweł
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4989529/
https://www.ncbi.nlm.nih.gov/pubmed/27535027
http://dx.doi.org/10.1186/s12938-016-0219-5
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author Koprowski, Robert
Olczyk, Paweł
author_facet Koprowski, Robert
Olczyk, Paweł
author_sort Koprowski, Robert
collection PubMed
description BACKGROUND: Segmentation of hyperspectral medical images is one of many image segmentation methods which require profiling. This profiling involves either the adjustment of existing, known image segmentation methods or a proposal of new dedicated methods of hyperspectral image segmentation. Taking into consideration the size of analysed data, the time of analysis is of major importance. Therefore, the authors proposed three new dedicated methods of hyperspectral image segmentation with special reference to the time of analysis. METHODS: The segmentation methods presented in this paper were tested and profiled to the images acquired from different hyperspectral cameras including SOC710 Hyperspectral Imaging System, Specim sCMOS-50-V10E. Correct functioning of the method was tested for over 10,000 2D images constituting the sequence of over 700 registrations of the areas of the left and right hand and the forearm. RESULTS: As a result, three new methods of hyperspectral image segmentation have been proposed: fast analysis of emissivity curves (SKE), 3D segmentation (S3D) and hierarchical segmentation (SH). They have the following features: are fully automatic; allow for implementation of fast segmentation methods; are profiled to hyperspectral image segmentation; use emissivity curves in the model form, can be applied in any type of objects not necessarily biological ones, are faster (SKE—2.3 ms, S3D—1949 ms, SH—844 ms for the computer with Intel(®) Core i7 4960X CPU 3.6 GHz) and more accurate (SKE—accuracy 79 %, S3D—90 %, SH—92 %) in comparison with typical methods known from the literature. CONCLUSIONS: Profiling and/or proposing new methods of hyperspectral image segmentation is an indispensable element of developing software. This ensures speed, repeatability and low sensitivity of the algorithm to changing parameters.
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spelling pubmed-49895292016-08-19 Segmentation in dermatological hyperspectral images: dedicated methods Koprowski, Robert Olczyk, Paweł Biomed Eng Online Research BACKGROUND: Segmentation of hyperspectral medical images is one of many image segmentation methods which require profiling. This profiling involves either the adjustment of existing, known image segmentation methods or a proposal of new dedicated methods of hyperspectral image segmentation. Taking into consideration the size of analysed data, the time of analysis is of major importance. Therefore, the authors proposed three new dedicated methods of hyperspectral image segmentation with special reference to the time of analysis. METHODS: The segmentation methods presented in this paper were tested and profiled to the images acquired from different hyperspectral cameras including SOC710 Hyperspectral Imaging System, Specim sCMOS-50-V10E. Correct functioning of the method was tested for over 10,000 2D images constituting the sequence of over 700 registrations of the areas of the left and right hand and the forearm. RESULTS: As a result, three new methods of hyperspectral image segmentation have been proposed: fast analysis of emissivity curves (SKE), 3D segmentation (S3D) and hierarchical segmentation (SH). They have the following features: are fully automatic; allow for implementation of fast segmentation methods; are profiled to hyperspectral image segmentation; use emissivity curves in the model form, can be applied in any type of objects not necessarily biological ones, are faster (SKE—2.3 ms, S3D—1949 ms, SH—844 ms for the computer with Intel(®) Core i7 4960X CPU 3.6 GHz) and more accurate (SKE—accuracy 79 %, S3D—90 %, SH—92 %) in comparison with typical methods known from the literature. CONCLUSIONS: Profiling and/or proposing new methods of hyperspectral image segmentation is an indispensable element of developing software. This ensures speed, repeatability and low sensitivity of the algorithm to changing parameters. BioMed Central 2016-08-17 /pmc/articles/PMC4989529/ /pubmed/27535027 http://dx.doi.org/10.1186/s12938-016-0219-5 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Koprowski, Robert
Olczyk, Paweł
Segmentation in dermatological hyperspectral images: dedicated methods
title Segmentation in dermatological hyperspectral images: dedicated methods
title_full Segmentation in dermatological hyperspectral images: dedicated methods
title_fullStr Segmentation in dermatological hyperspectral images: dedicated methods
title_full_unstemmed Segmentation in dermatological hyperspectral images: dedicated methods
title_short Segmentation in dermatological hyperspectral images: dedicated methods
title_sort segmentation in dermatological hyperspectral images: dedicated methods
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4989529/
https://www.ncbi.nlm.nih.gov/pubmed/27535027
http://dx.doi.org/10.1186/s12938-016-0219-5
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