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Biocatalytic Asymmetric Alkene Reduction: Crystal Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum
[Image: see text] The application of biocatalysis for the asymmetric reduction of activated C=C is a powerful tool for the manufacture of high-value chemical commodities. The biocatalytic potential of “-ene” reductases from the Old Yellow Enzyme (OYE) family of oxidoreductases is well-known; however...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2013
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990313/ https://www.ncbi.nlm.nih.gov/pubmed/27547488 http://dx.doi.org/10.1021/cs300709m |
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author | Mansell, David J. Toogood, Helen S. Waller, John Hughes, John M. X. Levy, Colin W. Gardiner, John M. Scrutton, Nigel S. |
author_facet | Mansell, David J. Toogood, Helen S. Waller, John Hughes, John M. X. Levy, Colin W. Gardiner, John M. Scrutton, Nigel S. |
author_sort | Mansell, David J. |
collection | PubMed |
description | [Image: see text] The application of biocatalysis for the asymmetric reduction of activated C=C is a powerful tool for the manufacture of high-value chemical commodities. The biocatalytic potential of “-ene” reductases from the Old Yellow Enzyme (OYE) family of oxidoreductases is well-known; however, the specificity of these enzymes toward mainly small molecule substrates has highlighted the need to discover “-ene” reductases from different enzymatic classes to broaden industrial applicability. Here, we describe the characterization of a flavin-free double bond reductase from Nicotiana tabacum (NtDBR), which belongs to the leukotriene B(4) dehydrogenase (LTD) subfamily of the zinc-independent, medium chain dehydrogenase/reductase superfamily of enzymes. Using steady-state kinetics and biotransformation reactions, we have demonstrated the regio- and stereospecificity of NtDBR against a variety of α,β-unsaturated activated alkenes. In addition to catalyzing the reduction of typical LTD substrates and several classical OYE-like substrates, NtDBR also exhibited complementary activity by reducing non-OYE substrates (i.e., reducing the exocyclic C=C double bond of (R)-pulegone) and in some cases showing an opposite stereopreference in comparison with the OYE family member pentaerythritol tetranitrate (PETN) reductase. This serves to augment classical OYE “-ene” reductase activity and, coupled with its aerobic stability, emphasizes the potential industrial value of NtDBR. Furthermore, we also report the X-ray crystal structures of the holo-, binary NADP(H)-bound, and ternary [NADP(+) and 4-hydroxy-3-methoxycinnamaldehyde (9a)-bound] NtDBR complexes. These will underpin structure-driven site-saturated mutagenesis studies aimed at enhancing the reactivity, stereochemistry, and specificity of this enzyme. |
format | Online Article Text |
id | pubmed-4990313 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-49903132016-08-19 Biocatalytic Asymmetric Alkene Reduction: Crystal Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum Mansell, David J. Toogood, Helen S. Waller, John Hughes, John M. X. Levy, Colin W. Gardiner, John M. Scrutton, Nigel S. ACS Catal [Image: see text] The application of biocatalysis for the asymmetric reduction of activated C=C is a powerful tool for the manufacture of high-value chemical commodities. The biocatalytic potential of “-ene” reductases from the Old Yellow Enzyme (OYE) family of oxidoreductases is well-known; however, the specificity of these enzymes toward mainly small molecule substrates has highlighted the need to discover “-ene” reductases from different enzymatic classes to broaden industrial applicability. Here, we describe the characterization of a flavin-free double bond reductase from Nicotiana tabacum (NtDBR), which belongs to the leukotriene B(4) dehydrogenase (LTD) subfamily of the zinc-independent, medium chain dehydrogenase/reductase superfamily of enzymes. Using steady-state kinetics and biotransformation reactions, we have demonstrated the regio- and stereospecificity of NtDBR against a variety of α,β-unsaturated activated alkenes. In addition to catalyzing the reduction of typical LTD substrates and several classical OYE-like substrates, NtDBR also exhibited complementary activity by reducing non-OYE substrates (i.e., reducing the exocyclic C=C double bond of (R)-pulegone) and in some cases showing an opposite stereopreference in comparison with the OYE family member pentaerythritol tetranitrate (PETN) reductase. This serves to augment classical OYE “-ene” reductase activity and, coupled with its aerobic stability, emphasizes the potential industrial value of NtDBR. Furthermore, we also report the X-ray crystal structures of the holo-, binary NADP(H)-bound, and ternary [NADP(+) and 4-hydroxy-3-methoxycinnamaldehyde (9a)-bound] NtDBR complexes. These will underpin structure-driven site-saturated mutagenesis studies aimed at enhancing the reactivity, stereochemistry, and specificity of this enzyme. American Chemical Society 2013-01-21 2013-03-01 /pmc/articles/PMC4990313/ /pubmed/27547488 http://dx.doi.org/10.1021/cs300709m Text en Copyright © 2013 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Mansell, David J. Toogood, Helen S. Waller, John Hughes, John M. X. Levy, Colin W. Gardiner, John M. Scrutton, Nigel S. Biocatalytic Asymmetric Alkene Reduction: Crystal Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title | Biocatalytic Asymmetric
Alkene Reduction: Crystal
Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title_full | Biocatalytic Asymmetric
Alkene Reduction: Crystal
Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title_fullStr | Biocatalytic Asymmetric
Alkene Reduction: Crystal
Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title_full_unstemmed | Biocatalytic Asymmetric
Alkene Reduction: Crystal
Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title_short | Biocatalytic Asymmetric
Alkene Reduction: Crystal
Structure and Characterization of a Double Bond Reductase from Nicotiana tabacum |
title_sort | biocatalytic asymmetric
alkene reduction: crystal
structure and characterization of a double bond reductase from nicotiana tabacum |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990313/ https://www.ncbi.nlm.nih.gov/pubmed/27547488 http://dx.doi.org/10.1021/cs300709m |
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