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COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data
The field of neuroimaging has embraced the need for sharing and collaboration. Data sharing mandates from public funding agencies and major journal publishers have spurred the development of data repositories and neuroinformatics consortia. However, efficient and effective data sharing still faces s...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990563/ https://www.ncbi.nlm.nih.gov/pubmed/27594820 http://dx.doi.org/10.3389/fnins.2016.00365 |
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author | Plis, Sergey M. Sarwate, Anand D. Wood, Dylan Dieringer, Christopher Landis, Drew Reed, Cory Panta, Sandeep R. Turner, Jessica A. Shoemaker, Jody M. Carter, Kim W. Thompson, Paul Hutchison, Kent Calhoun, Vince D. |
author_facet | Plis, Sergey M. Sarwate, Anand D. Wood, Dylan Dieringer, Christopher Landis, Drew Reed, Cory Panta, Sandeep R. Turner, Jessica A. Shoemaker, Jody M. Carter, Kim W. Thompson, Paul Hutchison, Kent Calhoun, Vince D. |
author_sort | Plis, Sergey M. |
collection | PubMed |
description | The field of neuroimaging has embraced the need for sharing and collaboration. Data sharing mandates from public funding agencies and major journal publishers have spurred the development of data repositories and neuroinformatics consortia. However, efficient and effective data sharing still faces several hurdles. For example, open data sharing is on the rise but is not suitable for sensitive data that are not easily shared, such as genetics. Current approaches can be cumbersome (such as negotiating multiple data sharing agreements). There are also significant data transfer, organization and computational challenges. Centralized repositories only partially address the issues. We propose a dynamic, decentralized platform for large scale analyses called the Collaborative Informatics and Neuroimaging Suite Toolkit for Anonymous Computation (COINSTAC). The COINSTAC solution can include data missing from central repositories, allows pooling of both open and “closed” repositories by developing privacy-preserving versions of widely-used algorithms, and incorporates the tools within an easy-to-use platform enabling distributed computation. We present an initial prototype system which we demonstrate on two multi-site data sets, without aggregating the data. In addition, by iterating across sites, the COINSTAC model enables meta-analytic solutions to converge to “pooled-data” solutions (i.e., as if the entire data were in hand). More advanced approaches such as feature generation, matrix factorization models, and preprocessing can be incorporated into such a model. In sum, COINSTAC enables access to the many currently unavailable data sets, a user friendly privacy enabled interface for decentralized analysis, and a powerful solution that complements existing data sharing solutions. |
format | Online Article Text |
id | pubmed-4990563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-49905632016-09-02 COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data Plis, Sergey M. Sarwate, Anand D. Wood, Dylan Dieringer, Christopher Landis, Drew Reed, Cory Panta, Sandeep R. Turner, Jessica A. Shoemaker, Jody M. Carter, Kim W. Thompson, Paul Hutchison, Kent Calhoun, Vince D. Front Neurosci Neuroscience The field of neuroimaging has embraced the need for sharing and collaboration. Data sharing mandates from public funding agencies and major journal publishers have spurred the development of data repositories and neuroinformatics consortia. However, efficient and effective data sharing still faces several hurdles. For example, open data sharing is on the rise but is not suitable for sensitive data that are not easily shared, such as genetics. Current approaches can be cumbersome (such as negotiating multiple data sharing agreements). There are also significant data transfer, organization and computational challenges. Centralized repositories only partially address the issues. We propose a dynamic, decentralized platform for large scale analyses called the Collaborative Informatics and Neuroimaging Suite Toolkit for Anonymous Computation (COINSTAC). The COINSTAC solution can include data missing from central repositories, allows pooling of both open and “closed” repositories by developing privacy-preserving versions of widely-used algorithms, and incorporates the tools within an easy-to-use platform enabling distributed computation. We present an initial prototype system which we demonstrate on two multi-site data sets, without aggregating the data. In addition, by iterating across sites, the COINSTAC model enables meta-analytic solutions to converge to “pooled-data” solutions (i.e., as if the entire data were in hand). More advanced approaches such as feature generation, matrix factorization models, and preprocessing can be incorporated into such a model. In sum, COINSTAC enables access to the many currently unavailable data sets, a user friendly privacy enabled interface for decentralized analysis, and a powerful solution that complements existing data sharing solutions. Frontiers Media S.A. 2016-08-19 /pmc/articles/PMC4990563/ /pubmed/27594820 http://dx.doi.org/10.3389/fnins.2016.00365 Text en Copyright © 2016 Plis, Sarwate, Wood, Dieringer, Landis, Reed, Panta, Turner, Shoemaker, Carter, Thompson, Hutchison and Calhoun. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Plis, Sergey M. Sarwate, Anand D. Wood, Dylan Dieringer, Christopher Landis, Drew Reed, Cory Panta, Sandeep R. Turner, Jessica A. Shoemaker, Jody M. Carter, Kim W. Thompson, Paul Hutchison, Kent Calhoun, Vince D. COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title | COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title_full | COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title_fullStr | COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title_full_unstemmed | COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title_short | COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data |
title_sort | coinstac: a privacy enabled model and prototype for leveraging and processing decentralized brain imaging data |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990563/ https://www.ncbi.nlm.nih.gov/pubmed/27594820 http://dx.doi.org/10.3389/fnins.2016.00365 |
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