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The Switch in a Genetic Toggle System with Lévy Noise

A bistable toggle switch is a paradigmatic model in the field of biology. The dynamics of the system induced by Gaussian noise has been intensively investigated, but Gaussian noise cannot incorporate large bursts typically occurring in real experiments. This paper aims to examine effects of variatio...

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Autores principales: Xu, Yong, Li, Yongge, Zhang, Hao, Li, Xiaofan, Kurths, Jürgen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990962/
https://www.ncbi.nlm.nih.gov/pubmed/27539010
http://dx.doi.org/10.1038/srep31505
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author Xu, Yong
Li, Yongge
Zhang, Hao
Li, Xiaofan
Kurths, Jürgen
author_facet Xu, Yong
Li, Yongge
Zhang, Hao
Li, Xiaofan
Kurths, Jürgen
author_sort Xu, Yong
collection PubMed
description A bistable toggle switch is a paradigmatic model in the field of biology. The dynamics of the system induced by Gaussian noise has been intensively investigated, but Gaussian noise cannot incorporate large bursts typically occurring in real experiments. This paper aims to examine effects of variations from one protein imposed by a non-Gaussian Lévy noise, which is able to describe even large jumps, on the coherent switch and the on/off switch via the steady-state probability density, the joint steady-state probability density, and the mean first passage time. We find that a large burst of one protein due to the Lévy noises can induce coherent switches even with small noise intensities in contrast to the Gaussian case which requires large intensities for this. The influences of the stability index, skewness parameter and noise intensity on the on/off switch are analyzed, leading to an adjustment of the concentrations of both proteins and a decision which stable point to stay most. The mean first passage times show complex effects under Lévy noise, especially the stability index and skewness parameter. Our results also imply that the presence of non-Gaussian Lévy noises has fundamentally changed the escape mechanism in such a system compared with Gaussian noise.
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spelling pubmed-49909622016-08-30 The Switch in a Genetic Toggle System with Lévy Noise Xu, Yong Li, Yongge Zhang, Hao Li, Xiaofan Kurths, Jürgen Sci Rep Article A bistable toggle switch is a paradigmatic model in the field of biology. The dynamics of the system induced by Gaussian noise has been intensively investigated, but Gaussian noise cannot incorporate large bursts typically occurring in real experiments. This paper aims to examine effects of variations from one protein imposed by a non-Gaussian Lévy noise, which is able to describe even large jumps, on the coherent switch and the on/off switch via the steady-state probability density, the joint steady-state probability density, and the mean first passage time. We find that a large burst of one protein due to the Lévy noises can induce coherent switches even with small noise intensities in contrast to the Gaussian case which requires large intensities for this. The influences of the stability index, skewness parameter and noise intensity on the on/off switch are analyzed, leading to an adjustment of the concentrations of both proteins and a decision which stable point to stay most. The mean first passage times show complex effects under Lévy noise, especially the stability index and skewness parameter. Our results also imply that the presence of non-Gaussian Lévy noises has fundamentally changed the escape mechanism in such a system compared with Gaussian noise. Nature Publishing Group 2016-08-19 /pmc/articles/PMC4990962/ /pubmed/27539010 http://dx.doi.org/10.1038/srep31505 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Xu, Yong
Li, Yongge
Zhang, Hao
Li, Xiaofan
Kurths, Jürgen
The Switch in a Genetic Toggle System with Lévy Noise
title The Switch in a Genetic Toggle System with Lévy Noise
title_full The Switch in a Genetic Toggle System with Lévy Noise
title_fullStr The Switch in a Genetic Toggle System with Lévy Noise
title_full_unstemmed The Switch in a Genetic Toggle System with Lévy Noise
title_short The Switch in a Genetic Toggle System with Lévy Noise
title_sort switch in a genetic toggle system with lévy noise
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990962/
https://www.ncbi.nlm.nih.gov/pubmed/27539010
http://dx.doi.org/10.1038/srep31505
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