Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease

Colletotrichum higginsianum is an ascomycete fungus causing anthracnose disease on numerous cultivated plants in the family Brassicaceae, as well as the model plant Arabidopsis thaliana. We report an assembly of the nuclear genome and gene annotation of this pathogen, which was obtained using a comb...

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Autores principales: Zampounis, Antonios, Pigné, Sandrine, Dallery, Jean-Félix, Wittenberg, Alexander H. J., Zhou, Shiguo, Schwartz, David C., Thon, Michael R., O’Connell, Richard J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Eukaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4991707/
https://www.ncbi.nlm.nih.gov/pubmed/27540062
http://dx.doi.org/10.1128/genomeA.00821-16
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author Zampounis, Antonios
Pigné, Sandrine
Dallery, Jean-Félix
Wittenberg, Alexander H. J.
Zhou, Shiguo
Schwartz, David C.
Thon, Michael R.
O’Connell, Richard J.
author_facet Zampounis, Antonios
Pigné, Sandrine
Dallery, Jean-Félix
Wittenberg, Alexander H. J.
Zhou, Shiguo
Schwartz, David C.
Thon, Michael R.
O’Connell, Richard J.
author_sort Zampounis, Antonios
collection PubMed
description Colletotrichum higginsianum is an ascomycete fungus causing anthracnose disease on numerous cultivated plants in the family Brassicaceae, as well as the model plant Arabidopsis thaliana. We report an assembly of the nuclear genome and gene annotation of this pathogen, which was obtained using a combination of PacBio long-read sequencing and optical mapping.
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spelling pubmed-49917072016-08-26 Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease Zampounis, Antonios Pigné, Sandrine Dallery, Jean-Félix Wittenberg, Alexander H. J. Zhou, Shiguo Schwartz, David C. Thon, Michael R. O’Connell, Richard J. Genome Announc Eukaryotes Colletotrichum higginsianum is an ascomycete fungus causing anthracnose disease on numerous cultivated plants in the family Brassicaceae, as well as the model plant Arabidopsis thaliana. We report an assembly of the nuclear genome and gene annotation of this pathogen, which was obtained using a combination of PacBio long-read sequencing and optical mapping. American Society for Microbiology 2016-08-18 /pmc/articles/PMC4991707/ /pubmed/27540062 http://dx.doi.org/10.1128/genomeA.00821-16 Text en Copyright © 2016 Zampounis et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Eukaryotes
Zampounis, Antonios
Pigné, Sandrine
Dallery, Jean-Félix
Wittenberg, Alexander H. J.
Zhou, Shiguo
Schwartz, David C.
Thon, Michael R.
O’Connell, Richard J.
Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title_full Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title_fullStr Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title_full_unstemmed Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title_short Genome Sequence and Annotation of Colletotrichum higginsianum, a Causal Agent of Crucifer Anthracnose Disease
title_sort genome sequence and annotation of colletotrichum higginsianum, a causal agent of crucifer anthracnose disease
topic Eukaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4991707/
https://www.ncbi.nlm.nih.gov/pubmed/27540062
http://dx.doi.org/10.1128/genomeA.00821-16
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