Cargando…

reChIP-seq reveals widespread bivalency of H3K4me3 and H3K27me3 in CD4(+) memory T cells

The combinatorial action of co-localizing chromatin modifications and regulators determines chromatin structure and function. However, identifying co-localizing chromatin features in a high-throughput manner remains a technical challenge. Here we describe a novel reChIP-seq approach and tailored bio...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kinkley, Sarah, Helmuth, Johannes, Polansky, Julia K., Dunkel, Ilona, Gasparoni, Gilles, Fröhler, Sebastian, Chen, Wei, Walter, Jörn, Hamann, Alf, Chung, Ho-Ryun
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4992058/ https://www.ncbi.nlm.nih.gov/pubmed/27530917 http://dx.doi.org/10.1038/ncomms12514

Ejemplares similares

H3K27me3-H3K4me1 transition at bivalent promoters instructs lineage specification in development
por: Yu, Yue, et al.
Publicado: (2023)

Bivalent promoter hypermethylation in cancer is linked to the H327me3/H3K4me3 ratio in embryonic stem cells
por: Dunican, Donnchadh S., et al.
Publicado: (2020)

PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3
por: Chung, Ho-Ryun, et al.
Publicado: (2016)

Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
por: Zeng, Zixian, et al.
Publicado: (2019)

The unfavorable clinical outcome of COVID-19 in smokers is mediated by H3K4me3, H3K9me3 and H3K27me3 histone marks
por: Shirvaliloo, Milad
Publicado: (2022)

Profiling of H3K4me3 and H3K27me3 and Their Roles in Gene Subfunctionalization in Allotetraploid Cotton
por: Zhang, Aicen, et al.
Publicado: (2021)

Distribution of H3K27me3, H3K9me3, and H3K4me3 along autophagy-related genes highly expressed in starved zebrafish myotubes
por: Biga, Peggy R., et al.
Publicado: (2017)

Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL
por: Qian, Shuiming, et al.
Publicado: (2018)

H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks
por: Igolkina, Anna A., et al.
Publicado: (2019)

Global analysis of H3K4me3 and H3K27me3 profiles in glioblastoma stem cells and identification of SLC17A7 as a bivalent tumor suppressor gene
por: Lin, Biaoyang, et al.
Publicado: (2015)

Expression of H3K4me3 and H3K9ac in breast cancer
por: Berger, Luisa, et al.
Publicado: (2020)

Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice
por: Chen, Xiangsong, et al.
Publicado: (2015)

Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem
por: Hussey, Steven G., et al.
Publicado: (2017)

Histone Modifications of H3K4me3, H3K9me3 and Lineage Gene Expressions in Chimeric Mouse Embryo
por: Salimi, Maryam, et al.
Publicado: (2020)

Unique Patterns of H3K4me3 and H3K27me3 in 2-Cell-like Embryonic Stem Cells
por: Zhang, Yanping, et al.
Publicado: (2021)

ChIP-seq profiling of H3K4me3 and H3K27me3 in an invasive insect, Bactrocera dorsalis
por: Zhao, Yan, et al.
Publicado: (2023)

CpG islands under selective pressure are enriched with H3K4me3, H3K27ac and H3K36me3 histone modifications
por: Akhtar, Most Mauluda, et al.
Publicado: (2013)

H3K4me3-related lncRNAs signature and comprehensive analysis of H3K4me3 regulating tumor immunity in lung adenocarcinoma
por: Fan, Tao, et al.
Publicado: (2023)

Thermal Manipulation During Embryogenesis Impacts H3K4me3 and H3K27me3 Histone Marks in Chicken Hypothalamus
por: David, Sarah-Anne, et al.
Publicado: (2019)

Coordination of zygotic genome activation entry and exit by H3K4me3 and H3K27me3 in porcine early embryos
por: Bu, Guowei, et al.
Publicado: (2022)

Computational inference of H3K4me3 and H3K27ac domain length
por: Zubek, Julian, et al.
Publicado: (2016)

Structural mechanism of bivalent histone H3K4me3K9me3 recognition by the Spindlin1/C11orf84 complex in rRNA transcription activation
por: Du, Yongming, et al.
Publicado: (2021)

The Association Between H3K4me3 and Antisense Transcription
por: Cui, Peng, et al.
Publicado: (2012)

Application of dual reading domains as novel reagents in chromatin biology reveals a new H3K9me3 and H3K36me2/3 bivalent chromatin state
por: Mauser, Rebekka, et al.
Publicado: (2017)

Analysis of H3K4me3 and H3K27me3 bivalent promotors in HER2+ breast cancer cell lines reveals variations depending on estrogen receptor status and significantly correlates with gene expression
por: Kaukonen, Damien, et al.
Publicado: (2020)

Contrasting roles of H3K4me3 and H3K9me3 in regulation of apoptosis and gemcitabine resistance in human pancreatic cancer cells
por: Lu, Chunwan, et al.
Publicado: (2018)

DNA methylation regulates discrimination of enhancers from promoters through a H3K4me1-H3K4me3 seesaw mechanism
por: Sharifi-Zarchi, Ali, et al.
Publicado: (2017)

H3K9me3 and H4K20me3 represent the epigenetic landscape for 53BP1 binding to DNA lesions
por: Svobodová Kovaříková, Alena, et al.
Publicado: (2018)

Gal-2 Increases H3K4me(3) and H3K9ac in Trophoblasts and Preeclampsia
por: Hahn, Laura, et al.
Publicado: (2022)

Abo1 is required for the H3K9me2 to H3K9me3 transition in heterochromatin
por: Dong, Wenbo, et al.
Publicado: (2020)

In Vivo Identification of H3K9me2/H3K79me3 as an Epigenetic Barrier to Carcinogenesis
por: Piro, Maria Cristina, et al.
Publicado: (2023)

KDM4A regulates the maternal-to-zygotic transition by protecting broad H3K4me3 domains from H3K9me3 invasion in oocytes
por: Sankar, Aditya, et al.
Publicado: (2020)

KDM4B-mediated reduction of H3K9me3 and H3K36me3 levels improves somatic cell reprogramming into pluripotency
por: Wei, Jingwei, et al.
Publicado: (2017)

Molecular basis for histone H3 “K4me3-K9me3/2” methylation pattern readout by Spindlin1
por: Zhao, Fan, et al.
Publicado: (2021)

Hypoxia increases genome-wide bivalent epigenetic marking by specific gain of H3K27me3
por: Prickaerts, Peggy, et al.
Publicado: (2016)

Prenatal and postnatal traffic pollution exposure, DNA methylation in Shank3 and MeCP2 promoter regions, H3K4me3 and H3K27me3 and sociability in rats’ offspring
por: Zhou, Qinfeng, et al.
Publicado: (2021)

Hdac3, Setdb1, and Kap1 mark H3K9me3/H3K14ac bivalent regions in young and aged liver
por: Price, Andrew J., et al.
Publicado: (2019)

JMJ Histone Demethylases Balance H3K27me3 and H3K4me3 Levels at the HSP21 Locus during Heat Acclimation in Arabidopsis
por: Yamaguchi, Nobutoshi, et al.
Publicado: (2021)

H3K9me3-binding proteins are dispensable for SETDB1/H3K9me3-dependent retroviral silencing
por: Maksakova, Irina A, et al.
Publicado: (2011)

Antagonistic Roles for H3K36me3 and H3K27me3 in the Cold-Induced Epigenetic Switch at Arabidopsis FLC
por: Yang, Hongchun, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_ljtoa090n0ecj64rif3rjt4cl9