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Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide
Two derivatives of the well-known iron chelator, (E)-N′-(2-hydroxybenzylidene)isonicotinohydrazide (SIH), substituted in the 5-position of the 2-hydroxybenzene ring by a methyl and a fluorine group viz. (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide, C(14)H(13)N(3)O(2), (I), and...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4992920/ https://www.ncbi.nlm.nih.gov/pubmed/27555945 http://dx.doi.org/10.1107/S2056989016009762 |
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author | Chainok, Kittipong Makmuang, Sureerat Kielar, Filip |
author_facet | Chainok, Kittipong Makmuang, Sureerat Kielar, Filip |
author_sort | Chainok, Kittipong |
collection | PubMed |
description | Two derivatives of the well-known iron chelator, (E)-N′-(2-hydroxybenzylidene)isonicotinohydrazide (SIH), substituted in the 5-position of the 2-hydroxybenzene ring by a methyl and a fluorine group viz. (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide, C(14)H(13)N(3)O(2), (I), and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide, C(13)H(10)FN(3)O(2), (II), have been prepared and characterized by single-crystal X-ray diffraction, (1)H NMR and mass spectrometry. The molecules of both compounds deviate slightly from planarity [r.m.s. deviations are 0.145 and 0.110 Å for (I) and (II), respectively] and adopt an E conformation with respect to the double bond of the hydrazone bridge. In each molecule, there is an intramolecular O—H⋯N hydrogen bond forming an S(6) ring motif. The dihedral angles between the mean planes of the isonicotinoyl ring and the cresol ring in (I) or the fluorophenol ring in (II) are 10.49 (6) and 9.43 (6)°, respectively. In the crystals of both compounds, zigzag chains are formed via N—H⋯N hydrogen bonds, in the [10-1] direction for (I) and [010] for (II). In (I), the chains are linked by weak C—H⋯π and π–π stacking interactions [centroid-to-centroid distances = 3.6783 (8) Å; inter-planar angle = 10.94 (5)°], leading to the formation of a three-dimensional supramolecular architecture. In (II), adjacent chains are connected through C—H⋯O hydrogen bonds to form sheets parallel to (100), which enclose R (4) (4)(30) ring motifs. The sheets are linked by weak C—H⋯π and π–π [centroid-to-centroid distance = 3.7147 (8) Å; inter-planar angle = 10.94 (5)°] interactions, forming a three-dimensional supramolecular architecture. |
format | Online Article Text |
id | pubmed-4992920 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-49929202016-08-23 Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide Chainok, Kittipong Makmuang, Sureerat Kielar, Filip Acta Crystallogr E Crystallogr Commun Research Communications Two derivatives of the well-known iron chelator, (E)-N′-(2-hydroxybenzylidene)isonicotinohydrazide (SIH), substituted in the 5-position of the 2-hydroxybenzene ring by a methyl and a fluorine group viz. (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide, C(14)H(13)N(3)O(2), (I), and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide, C(13)H(10)FN(3)O(2), (II), have been prepared and characterized by single-crystal X-ray diffraction, (1)H NMR and mass spectrometry. The molecules of both compounds deviate slightly from planarity [r.m.s. deviations are 0.145 and 0.110 Å for (I) and (II), respectively] and adopt an E conformation with respect to the double bond of the hydrazone bridge. In each molecule, there is an intramolecular O—H⋯N hydrogen bond forming an S(6) ring motif. The dihedral angles between the mean planes of the isonicotinoyl ring and the cresol ring in (I) or the fluorophenol ring in (II) are 10.49 (6) and 9.43 (6)°, respectively. In the crystals of both compounds, zigzag chains are formed via N—H⋯N hydrogen bonds, in the [10-1] direction for (I) and [010] for (II). In (I), the chains are linked by weak C—H⋯π and π–π stacking interactions [centroid-to-centroid distances = 3.6783 (8) Å; inter-planar angle = 10.94 (5)°], leading to the formation of a three-dimensional supramolecular architecture. In (II), adjacent chains are connected through C—H⋯O hydrogen bonds to form sheets parallel to (100), which enclose R (4) (4)(30) ring motifs. The sheets are linked by weak C—H⋯π and π–π [centroid-to-centroid distance = 3.7147 (8) Å; inter-planar angle = 10.94 (5)°] interactions, forming a three-dimensional supramolecular architecture. International Union of Crystallography 2016-06-17 /pmc/articles/PMC4992920/ /pubmed/27555945 http://dx.doi.org/10.1107/S2056989016009762 Text en © Chainok et al. 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Chainok, Kittipong Makmuang, Sureerat Kielar, Filip Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title | Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title_full | Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title_fullStr | Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title_full_unstemmed | Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title_short | Crystal structures of (E)-N′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (E)-N′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
title_sort | crystal structures of (e)-n′-(2-hydroxy-5-methylbenzylidene)isonicotinohydrazide and (e)-n′-(5-fluoro-2-hydroxybenzylidene)isonicotinohydrazide |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4992920/ https://www.ncbi.nlm.nih.gov/pubmed/27555945 http://dx.doi.org/10.1107/S2056989016009762 |
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