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Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
BACKGROUND: Transitions from marine to intertidal and terrestrial habitats resulted in a significant adaptive radiation within the Panpulmonata (Gastropoda: Heterobranchia). This clade comprises several groups that invaded the land realm independently and in different time periods, e.g., Ellobioidea...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4994307/ https://www.ncbi.nlm.nih.gov/pubmed/27549326 http://dx.doi.org/10.1186/s12862-016-0735-8 |
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author | Romero, Pedro E. Weigand, Alexander M. Pfenninger, Markus |
author_facet | Romero, Pedro E. Weigand, Alexander M. Pfenninger, Markus |
author_sort | Romero, Pedro E. |
collection | PubMed |
description | BACKGROUND: Transitions from marine to intertidal and terrestrial habitats resulted in a significant adaptive radiation within the Panpulmonata (Gastropoda: Heterobranchia). This clade comprises several groups that invaded the land realm independently and in different time periods, e.g., Ellobioidea, Systellomatophora, and Stylommatophora. Thus, mitochondrial genomes of panpulmonate gastropods are promising to screen for adaptive molecular signatures related to land invasions. RESULTS: We obtained three complete mitochondrial genomes of terrestrial panpulmonates, i.e., the ellobiid Carychium tridentatum, and the stylommatophorans Arion rufus and Helicella itala. Our dataset consisted of 50 mitogenomes comprising almost all major panpulmonate lineages. The phylogenetic tree based on mitochondrial genes supports the monophyly of the clade Panpulmonata. Terrestrial lineages were sampled from Ellobioidea (1 sp.) and Stylommatophora (9 spp.). The branch-site test of positive selection detected significant non-synonymous changes in the terrestrial branches leading to Carychium (Ellobiodea) and Stylommatophora. These convergent changes occurred in the cob and nad5 genes (OXPHOS complex III and I, respectively). CONCLUSIONS: The convergence of the non-synonymous changes in cob and nad5 suggest possible ancient episodes of positive selection related to adaptations to non-marine habitats. The positively selected sites in our data are in agreement with previous results in vertebrates suggesting a general pattern of adaptation to the new metabolic requirements. The demand for energy due to the colonization of land (for example, to move and sustain the body mass in the new habitat) and the necessity to tolerate new conditions of abiotic stress may have changed the physiological constraints in the early terrestrial panpulmonates and triggered adaptations at the mitochondrial level. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12862-016-0735-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4994307 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-49943072016-08-24 Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life Romero, Pedro E. Weigand, Alexander M. Pfenninger, Markus BMC Evol Biol Research Article BACKGROUND: Transitions from marine to intertidal and terrestrial habitats resulted in a significant adaptive radiation within the Panpulmonata (Gastropoda: Heterobranchia). This clade comprises several groups that invaded the land realm independently and in different time periods, e.g., Ellobioidea, Systellomatophora, and Stylommatophora. Thus, mitochondrial genomes of panpulmonate gastropods are promising to screen for adaptive molecular signatures related to land invasions. RESULTS: We obtained three complete mitochondrial genomes of terrestrial panpulmonates, i.e., the ellobiid Carychium tridentatum, and the stylommatophorans Arion rufus and Helicella itala. Our dataset consisted of 50 mitogenomes comprising almost all major panpulmonate lineages. The phylogenetic tree based on mitochondrial genes supports the monophyly of the clade Panpulmonata. Terrestrial lineages were sampled from Ellobioidea (1 sp.) and Stylommatophora (9 spp.). The branch-site test of positive selection detected significant non-synonymous changes in the terrestrial branches leading to Carychium (Ellobiodea) and Stylommatophora. These convergent changes occurred in the cob and nad5 genes (OXPHOS complex III and I, respectively). CONCLUSIONS: The convergence of the non-synonymous changes in cob and nad5 suggest possible ancient episodes of positive selection related to adaptations to non-marine habitats. The positively selected sites in our data are in agreement with previous results in vertebrates suggesting a general pattern of adaptation to the new metabolic requirements. The demand for energy due to the colonization of land (for example, to move and sustain the body mass in the new habitat) and the necessity to tolerate new conditions of abiotic stress may have changed the physiological constraints in the early terrestrial panpulmonates and triggered adaptations at the mitochondrial level. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12862-016-0735-8) contains supplementary material, which is available to authorized users. BioMed Central 2016-08-22 /pmc/articles/PMC4994307/ /pubmed/27549326 http://dx.doi.org/10.1186/s12862-016-0735-8 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Romero, Pedro E. Weigand, Alexander M. Pfenninger, Markus Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title | Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title_full | Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title_fullStr | Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title_full_unstemmed | Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title_short | Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
title_sort | positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4994307/ https://www.ncbi.nlm.nih.gov/pubmed/27549326 http://dx.doi.org/10.1186/s12862-016-0735-8 |
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