Cargando…

Functional characterization of open chromatin in bidirectional promoters of rice

Bidirectional gene pairs tend to be highly coregulated and function in similar biological processes in eukaryotic genomes. Structural features and functional consequences of bidirectional promoters (BDPs) have received considerable attention among diverse species. However, the underlying mechanisms...

Descripción completa

Detalles Bibliográficos
Autores principales:	Fang, Yuan, Wang, Ximeng, Wang, Lei, Pan, Xiucai, Xiao, Jin, Wang, Xiu-e, Wu, Yufeng, Zhang, Wenli
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4997330/ https://www.ncbi.nlm.nih.gov/pubmed/27558448 http://dx.doi.org/10.1038/srep32088

Ejemplares similares

Histone modifications facilitate the coexpression of bidirectional promoters in rice
por: Fang, Yuan, et al.
Publicado: (2016)

Chromatin states responsible for the regulation of differentially expressed genes under (60)Co~γ ray radiation in rice
por: Pan, Xiucai, et al.
Publicado: (2017)

Isolation and Functional Characterization of Bidirectional Promoters in Rice
por: Wang, Rui, et al.
Publicado: (2016)

Characterization of functional relationships of R-loops with gene transcription and epigenetic modifications in rice
por: Fang, Yuan, et al.
Publicado: (2019)

Characterization of Transposon-Derived Accessible Chromatin Regions in Rice (Oryza Sativa)
por: Zhang, Aicen, et al.
Publicado: (2022)

Bidirectional k-nearest neighbor spatial crowdsourcing allocation protocol based on edge computing
por: Zhang, Jing, et al.
Publicado: (2023)

Bidirectional transcription initiation marks accessible chromatin and is not specific to enhancers
por: Young, Robert S., et al.
Publicado: (2017)

DELLA‐mediated gene repression is maintained by chromatin modification in rice
por: Li, Junjie, et al.
Publicado: (2023)

Searching for bidirectional promoters in Arabidopsis thaliana
por: Wang, Quan, et al.
Publicado: (2009)

Identification and functional characterization of bidirectional gene pairs and their intergenic regions in maize
por: Liu, Xiaoqing, et al.
Publicado: (2014)

Prediction-based approaches to characterize bidirectional promoters in the mammalian genome
por: Yang, Mary Qu, et al.
Publicado: (2008)

Bidirectional promoters exhibit characteristic chromatin modification signature associated with transcription elongation in both sense and antisense directions
por: Jangid, Rahul Kumar, et al.
Publicado: (2018)

Open chromatin interaction maps reveal functional regulatory elements and chromatin architecture variations during wheat evolution
por: Yuan, Jingya, et al.
Publicado: (2022)

Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains
por: Jiang, Shuai, et al.
Publicado: (2020)

Genome-wide chromatin accessibility analysis unveils open chromatin convergent evolution during polyploidization in cotton
por: Han, Jinlei, et al.
Publicado: (2022)

Functional characterization of an inducible bidirectional promoter from Fusarium oxysporum f. sp. cubense
por: Dash, Ashutosh, et al.
Publicado: (2020)

Bidirectional manipulation of iodine redox kinetics in aqueous Fe–I(2) electrochemistry
por: Zhang, Weiwei, et al.
Publicado: (2023)

Structural and Functional Analysis of a Bidirectional Promoter from Gossypium hirsutum in Arabidopsis
por: Yang, Jiangtao, et al.
Publicado: (2018)

Regulatory Mechanism for Absence Seizures in Bidirectional Interactive Thalamocortical Model via Different Targeted Therapy Schemes
por: Zhang, Hudong, et al.
Publicado: (2021)

FACER: comprehensive molecular and functional characterization of epigenetic chromatin regulators
por: Lu, Jianping, et al.
Publicado: (2018)

Intergenic Locations of Rice Centromeric Chromatin
por: Yan, Huihuang, et al.
Publicado: (2008)

Inflammation and Overlap of Irritable Bowel Syndrome and Functional Dyspepsia
por: Wang, Congzhen, et al.
Publicado: (2021)

Cas9 Functionally Opens Chromatin
por: Barkal, Amira A., et al.
Publicado: (2016)

Bidirectional histone-gene promoters in Aspergillus: characterization and application for multi-gene expression
por: Rendsvig, Jakob K. H., et al.
Publicado: (2019)

Low cell number ChIP‐seq reveals chromatin state‐based regulation of gene transcription in the rice male meiocytes
por: Zhang, Aicen, et al.
Publicado: (2022)

Comparative analyses of bidirectional promoters in vertebrates
por: Yang, Mary Qu, et al.
Publicado: (2008)

Reduction of Intracellular Tension and Cell Adhesion Promotes Open Chromatin Structure and Enhances Cell Reprogramming
por: Soto, Jennifer, et al.
Publicado: (2023)

DNA methylation in transposable elements buffers the connection between three-dimensional chromatin organization and gene transcription upon rice genome duplication
por: Sun, Zhenfei, et al.
Publicado: (2022)

Rice SUV3 is a bidirectional helicase that binds both DNA and RNA
por: Tuteja, Narendra, et al.
Publicado: (2014)

Characterization of bidirectional gene pairs in The Cancer Genome Atlas (TCGA) dataset
por: Tu, Juchuanli, et al.
Publicado: (2019)

Comprehensive construction strategy of bidirectional green tissue‐specific synthetic promoters
por: Bai, Jiuyuan, et al.
Publicado: (2019)

Genome-wide characterization of i-motifs and their potential roles in the stability and evolution of transposable elements in rice
por: Ma, Xing, et al.
Publicado: (2022)

Characterization of Xanthomonas oryzae-Responsive cis-Acting Element in the Promoter of Rice Race-Specific Susceptibility Gene Xa13
por: Yuan, Ting, et al.
Publicado: (2011)

Cytoplasmic Organelle DNA Preferentially Inserts into Open Chromatin
por: Wang, Dong, et al.
Publicado: (2013)

Characterization of chromatin regulators identified prognosis and heterogeneity in hepatocellular carcinoma
por: Dai, Yin-wei, et al.
Publicado: (2022)

Genome-Wide Nucleosome Positioning Is Orchestrated by Genomic Regions Associated with DNase I Hypersensitivity in Rice
por: Wu, Yufeng, et al.
Publicado: (2014)

Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana
por: Zhao, Hainan, et al.
Publicado: (2020)

Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips
por: Feng, Dan, et al.
Publicado: (2022)

Mutations in the Rice OsCHR4 Gene, Encoding a CHD3 Family Chromatin Remodeler, Induce Narrow and Rolled Leaves with Increased Cuticular Wax
por: Guo, Tingting, et al.
Publicado: (2019)

Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration
por: Zhang, Yu-Chan, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_u5d78f48fo33jltrru3jupbgdg