Transcriptomic SNP discovery for custom genotyping arrays: impacts of sequence data, SNP calling method and genotyping technology on the probability of validation success

BACKGROUND: Single nucleotide polymorphism (SNP) discovery is an important goal of many studies. However, the number of ‘putative’ SNPs discovered from a sequence resource may not provide a reliable indication of the number that will successfully validate with a given genotyping technology. For this...

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Detalles Bibliográficos
Autores principales: Humble, Emily, Thorne, Michael A. S., Forcada, Jaume, Hoffman, Joseph I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000416/
https://www.ncbi.nlm.nih.gov/pubmed/27562535
http://dx.doi.org/10.1186/s13104-016-2209-x

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000416/
https://www.ncbi.nlm.nih.gov/pubmed/27562535
http://dx.doi.org/10.1186/s13104-016-2209-x

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