First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Arthrobacter agilis strain L77, is a plant growth promoting and cold active hydrolytic enzymes producing psychrotrophic bacterium, isolated from Pangong Lake, a subglacial lake in north western Himalayas, India. Genome analysis revealed metabolic versatility with genes involved in metabolism and col...

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Autores principales: Singh, Ram N., Gaba, Sonam, Yadav, Ajar N., Gaur, Prakhar, Gulati, Sneha, Kaushik, Rajeev, Saxena, Anil K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Extended Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000428/
https://www.ncbi.nlm.nih.gov/pubmed/27570579
http://dx.doi.org/10.1186/s40793-016-0176-4
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author Singh, Ram N.
Gaba, Sonam
Yadav, Ajar N.
Gaur, Prakhar
Gulati, Sneha
Kaushik, Rajeev
Saxena, Anil K.
author_facet Singh, Ram N.
Gaba, Sonam
Yadav, Ajar N.
Gaur, Prakhar
Gulati, Sneha
Kaushik, Rajeev
Saxena, Anil K.
author_sort Singh, Ram N.
collection PubMed
description Arthrobacter agilis strain L77, is a plant growth promoting and cold active hydrolytic enzymes producing psychrotrophic bacterium, isolated from Pangong Lake, a subglacial lake in north western Himalayas, India. Genome analysis revealed metabolic versatility with genes involved in metabolism and cold shock adaptation, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of Arthrobacter agilis strain L77 consists of 3,608,439 bp (3.60 Mb) of a circular chromosome. The genome comprises of 3316 protein coding genes and 74 RNA genes, 725 hypothetical proteins, 25 pseudo-genes and 1404 unique genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0176-4) contains supplementary material, which is available to authorized users.
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spelling pubmed-50004282016-08-27 First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77 Singh, Ram N. Gaba, Sonam Yadav, Ajar N. Gaur, Prakhar Gulati, Sneha Kaushik, Rajeev Saxena, Anil K. Stand Genomic Sci Extended Genome Report Arthrobacter agilis strain L77, is a plant growth promoting and cold active hydrolytic enzymes producing psychrotrophic bacterium, isolated from Pangong Lake, a subglacial lake in north western Himalayas, India. Genome analysis revealed metabolic versatility with genes involved in metabolism and cold shock adaptation, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of Arthrobacter agilis strain L77 consists of 3,608,439 bp (3.60 Mb) of a circular chromosome. The genome comprises of 3316 protein coding genes and 74 RNA genes, 725 hypothetical proteins, 25 pseudo-genes and 1404 unique genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0176-4) contains supplementary material, which is available to authorized users. BioMed Central 2016-08-26 /pmc/articles/PMC5000428/ /pubmed/27570579 http://dx.doi.org/10.1186/s40793-016-0176-4 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Extended Genome Report
Singh, Ram N.
Gaba, Sonam
Yadav, Ajar N.
Gaur, Prakhar
Gulati, Sneha
Kaushik, Rajeev
Saxena, Anil K.
First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title_full First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title_fullStr First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title_full_unstemmed First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title_short First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77
title_sort first high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic arthrobacter agilis strain l77
topic Extended Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000428/
https://www.ncbi.nlm.nih.gov/pubmed/27570579
http://dx.doi.org/10.1186/s40793-016-0176-4
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