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Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea
Plants, as sessile organisms, can suffer serious growth and developmental consequences under cold stress conditions. Glutathione transferases (GSTs, EC 2.5.1.18) are ubiquitous and multifunctional conjugating proteins, which play a major role in stress responses by preventing oxidative damage by rea...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000609/ https://www.ncbi.nlm.nih.gov/pubmed/27472324 http://dx.doi.org/10.3390/ijms17081211 |
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author | Vijayakumar, Harshavardhanan Thamilarasan, Senthil Kumar Shanmugam, Ashokraj Natarajan, Sathishkumar Jung, Hee-Jeong Park, Jong-In Kim, HyeRan Chung, Mi-Young Nou, Ill-Sup |
author_facet | Vijayakumar, Harshavardhanan Thamilarasan, Senthil Kumar Shanmugam, Ashokraj Natarajan, Sathishkumar Jung, Hee-Jeong Park, Jong-In Kim, HyeRan Chung, Mi-Young Nou, Ill-Sup |
author_sort | Vijayakumar, Harshavardhanan |
collection | PubMed |
description | Plants, as sessile organisms, can suffer serious growth and developmental consequences under cold stress conditions. Glutathione transferases (GSTs, EC 2.5.1.18) are ubiquitous and multifunctional conjugating proteins, which play a major role in stress responses by preventing oxidative damage by reactive oxygen species (ROS). Currently, understanding of their function(s) during different biochemical and signaling pathways under cold stress condition remain unclear. In this study, using combined computational strategy, we identified 65 Brassica oleracea glutathione transferases (BoGST) and characterized them based on evolutionary analysis into 11 classes. Inter-species and intra-species duplication was evident between BoGSTs and Arabidopsis GSTs. Based on localization analyses, we propose possible pathways in which GST genes are involved during cold stress. Further, expression analysis of the predicted putative functions for GST genes were investigated in two cold contrasting genotypes (cold tolerance and susceptible) under cold condition, most of these genes were highly expressed at 6 h and 1 h in the cold tolerant (CT) and cold susceptible (CS) lines, respectively. Overall, BoGSTU19, BoGSTU24, BoGSTF10 are candidate genes highly expressed in B. oleracea. Further investigation of GST superfamily in B. oleracea will aid in understanding complex mechanism underlying cold tolerance in plants. |
format | Online Article Text |
id | pubmed-5000609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-50006092016-09-01 Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea Vijayakumar, Harshavardhanan Thamilarasan, Senthil Kumar Shanmugam, Ashokraj Natarajan, Sathishkumar Jung, Hee-Jeong Park, Jong-In Kim, HyeRan Chung, Mi-Young Nou, Ill-Sup Int J Mol Sci Article Plants, as sessile organisms, can suffer serious growth and developmental consequences under cold stress conditions. Glutathione transferases (GSTs, EC 2.5.1.18) are ubiquitous and multifunctional conjugating proteins, which play a major role in stress responses by preventing oxidative damage by reactive oxygen species (ROS). Currently, understanding of their function(s) during different biochemical and signaling pathways under cold stress condition remain unclear. In this study, using combined computational strategy, we identified 65 Brassica oleracea glutathione transferases (BoGST) and characterized them based on evolutionary analysis into 11 classes. Inter-species and intra-species duplication was evident between BoGSTs and Arabidopsis GSTs. Based on localization analyses, we propose possible pathways in which GST genes are involved during cold stress. Further, expression analysis of the predicted putative functions for GST genes were investigated in two cold contrasting genotypes (cold tolerance and susceptible) under cold condition, most of these genes were highly expressed at 6 h and 1 h in the cold tolerant (CT) and cold susceptible (CS) lines, respectively. Overall, BoGSTU19, BoGSTU24, BoGSTF10 are candidate genes highly expressed in B. oleracea. Further investigation of GST superfamily in B. oleracea will aid in understanding complex mechanism underlying cold tolerance in plants. MDPI 2016-07-27 /pmc/articles/PMC5000609/ /pubmed/27472324 http://dx.doi.org/10.3390/ijms17081211 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Vijayakumar, Harshavardhanan Thamilarasan, Senthil Kumar Shanmugam, Ashokraj Natarajan, Sathishkumar Jung, Hee-Jeong Park, Jong-In Kim, HyeRan Chung, Mi-Young Nou, Ill-Sup Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title | Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title_full | Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title_fullStr | Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title_full_unstemmed | Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title_short | Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea |
title_sort | glutathione transferases superfamily: cold-inducible expression of distinct gst genes in brassica oleracea |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000609/ https://www.ncbi.nlm.nih.gov/pubmed/27472324 http://dx.doi.org/10.3390/ijms17081211 |
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