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Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe
BACKGROUND: We recently reported the identification of Bacillus sp. NRRL B-14911 that induces heart autoimmunity by generating cardiac-reactive T cells through molecular mimicry. This marine bacterium was originally isolated from the Gulf of Mexico, but no associations with human diseases were repor...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001198/ https://www.ncbi.nlm.nih.gov/pubmed/27557119 http://dx.doi.org/10.1186/s12864-016-2900-2 |
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author | Massilamany, Chandirasegaran Mohammed, Akram Loy, John Dustin Purvis, Tanya Krishnan, Bharathi Basavalingappa, Rakesh H. Kelley, Christy M. Guda, Chittibabu Barletta, Raúl G. Moriyama, Etsuko N. Smith, Timothy P. L. Reddy, Jay |
author_facet | Massilamany, Chandirasegaran Mohammed, Akram Loy, John Dustin Purvis, Tanya Krishnan, Bharathi Basavalingappa, Rakesh H. Kelley, Christy M. Guda, Chittibabu Barletta, Raúl G. Moriyama, Etsuko N. Smith, Timothy P. L. Reddy, Jay |
author_sort | Massilamany, Chandirasegaran |
collection | PubMed |
description | BACKGROUND: We recently reported the identification of Bacillus sp. NRRL B-14911 that induces heart autoimmunity by generating cardiac-reactive T cells through molecular mimicry. This marine bacterium was originally isolated from the Gulf of Mexico, but no associations with human diseases were reported. Therefore, to characterize its biological and medical significance, we sought to determine and analyze the complete genome sequence of Bacillus sp. NRRL B-14911. RESULTS: Based on the phylogenetic analysis of 16S ribosomal RNA (rRNA) genes, sequence analysis of the 16S-23S rDNA intergenic transcribed spacers, phenotypic microarray, and matrix-assisted laser desorption ionization time-of-flight mass spectrometry, we propose that this organism belongs to the species Bacillus infantis, previously shown to be associated with sepsis in a newborn child. Analysis of the complete genome of Bacillus sp. NRRL B-14911 revealed several virulence factors including adhesins, invasins, colonization factors, siderophores and transporters. Likewise, the bacterial genome encodes a wide range of methyl transferases, transporters, enzymatic and biochemical pathways, and insertion sequence elements that are distinct from other closely related bacilli. CONCLUSIONS: The complete genome sequence of Bacillus sp. NRRL B-14911 provided in this study may facilitate genetic manipulations to assess gene functions associated with bacterial survival and virulence. Additionally, this bacterium may serve as a useful tool to establish a disease model that permits systematic analysis of autoimmune events in various susceptible rodent strains. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2900-2) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5001198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-50011982016-09-06 Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe Massilamany, Chandirasegaran Mohammed, Akram Loy, John Dustin Purvis, Tanya Krishnan, Bharathi Basavalingappa, Rakesh H. Kelley, Christy M. Guda, Chittibabu Barletta, Raúl G. Moriyama, Etsuko N. Smith, Timothy P. L. Reddy, Jay BMC Genomics Research BACKGROUND: We recently reported the identification of Bacillus sp. NRRL B-14911 that induces heart autoimmunity by generating cardiac-reactive T cells through molecular mimicry. This marine bacterium was originally isolated from the Gulf of Mexico, but no associations with human diseases were reported. Therefore, to characterize its biological and medical significance, we sought to determine and analyze the complete genome sequence of Bacillus sp. NRRL B-14911. RESULTS: Based on the phylogenetic analysis of 16S ribosomal RNA (rRNA) genes, sequence analysis of the 16S-23S rDNA intergenic transcribed spacers, phenotypic microarray, and matrix-assisted laser desorption ionization time-of-flight mass spectrometry, we propose that this organism belongs to the species Bacillus infantis, previously shown to be associated with sepsis in a newborn child. Analysis of the complete genome of Bacillus sp. NRRL B-14911 revealed several virulence factors including adhesins, invasins, colonization factors, siderophores and transporters. Likewise, the bacterial genome encodes a wide range of methyl transferases, transporters, enzymatic and biochemical pathways, and insertion sequence elements that are distinct from other closely related bacilli. CONCLUSIONS: The complete genome sequence of Bacillus sp. NRRL B-14911 provided in this study may facilitate genetic manipulations to assess gene functions associated with bacterial survival and virulence. Additionally, this bacterium may serve as a useful tool to establish a disease model that permits systematic analysis of autoimmune events in various susceptible rodent strains. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2900-2) contains supplementary material, which is available to authorized users. BioMed Central 2016-08-22 /pmc/articles/PMC5001198/ /pubmed/27557119 http://dx.doi.org/10.1186/s12864-016-2900-2 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Massilamany, Chandirasegaran Mohammed, Akram Loy, John Dustin Purvis, Tanya Krishnan, Bharathi Basavalingappa, Rakesh H. Kelley, Christy M. Guda, Chittibabu Barletta, Raúl G. Moriyama, Etsuko N. Smith, Timothy P. L. Reddy, Jay Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title | Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title_full | Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title_fullStr | Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title_full_unstemmed | Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title_short | Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe |
title_sort | whole genomic sequence analysis of bacillus infantis: defining the genetic blueprint of strain nrrl b-14911, an emerging cardiopathogenic microbe |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001198/ https://www.ncbi.nlm.nih.gov/pubmed/27557119 http://dx.doi.org/10.1186/s12864-016-2900-2 |
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