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Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summariz...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001779/ https://www.ncbi.nlm.nih.gov/pubmed/27570654 |
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author | Finkelstein, Joseph Chen, Qinlang Adams, Hayden Friedman, Carol |
author_facet | Finkelstein, Joseph Chen, Qinlang Adams, Hayden Friedman, Carol |
author_sort | Finkelstein, Joseph |
collection | PubMed |
description | Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summarize the results. In this study, a method is developed to automatically detect and summarize ADRs from journal articles, rank them and present them to physicians in a user-friendly interface. The method studied ADRs for 6 drugs and returned on average 4.8 ADRs that were correct. The results demonstrated this method was feasible and effective. This method can be applied in clinical practice for assisting physicians to efficiently obtain information about ADRs associated with specific drugs. Automated summarization of ADR information from recent publications may facilitate translation of academic research into actionable information at point of care. |
format | Online Article Text |
id | pubmed-5001779 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-50017792016-08-26 Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed Finkelstein, Joseph Chen, Qinlang Adams, Hayden Friedman, Carol AMIA Jt Summits Transl Sci Proc Articles Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summarize the results. In this study, a method is developed to automatically detect and summarize ADRs from journal articles, rank them and present them to physicians in a user-friendly interface. The method studied ADRs for 6 drugs and returned on average 4.8 ADRs that were correct. The results demonstrated this method was feasible and effective. This method can be applied in clinical practice for assisting physicians to efficiently obtain information about ADRs associated with specific drugs. Automated summarization of ADR information from recent publications may facilitate translation of academic research into actionable information at point of care. American Medical Informatics Association 2016-07-20 /pmc/articles/PMC5001779/ /pubmed/27570654 Text en ©2016 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Finkelstein, Joseph Chen, Qinlang Adams, Hayden Friedman, Carol Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title | Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title_full | Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title_fullStr | Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title_full_unstemmed | Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title_short | Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed |
title_sort | automated summarization of publications associated with adverse drug reactions from pubmed |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001779/ https://www.ncbi.nlm.nih.gov/pubmed/27570654 |
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