Cargando…

Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed

Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summariz...

Descripción completa

Detalles Bibliográficos
Autores principales: Finkelstein, Joseph, Chen, Qinlang, Adams, Hayden, Friedman, Carol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001779/
https://www.ncbi.nlm.nih.gov/pubmed/27570654
_version_ 1782450483152027648
author Finkelstein, Joseph
Chen, Qinlang
Adams, Hayden
Friedman, Carol
author_facet Finkelstein, Joseph
Chen, Qinlang
Adams, Hayden
Friedman, Carol
author_sort Finkelstein, Joseph
collection PubMed
description Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summarize the results. In this study, a method is developed to automatically detect and summarize ADRs from journal articles, rank them and present them to physicians in a user-friendly interface. The method studied ADRs for 6 drugs and returned on average 4.8 ADRs that were correct. The results demonstrated this method was feasible and effective. This method can be applied in clinical practice for assisting physicians to efficiently obtain information about ADRs associated with specific drugs. Automated summarization of ADR information from recent publications may facilitate translation of academic research into actionable information at point of care.
format Online
Article
Text
id pubmed-5001779
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher American Medical Informatics Association
record_format MEDLINE/PubMed
spelling pubmed-50017792016-08-26 Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed Finkelstein, Joseph Chen, Qinlang Adams, Hayden Friedman, Carol AMIA Jt Summits Transl Sci Proc Articles Academic literature provides rich and up-to-date information concerning adverse drug reactions (ADR), but it is time consuming and labor intensive for physicians to obtain information of ADRs from academic literature because they would have to generate queries, review retrieved articles and summarize the results. In this study, a method is developed to automatically detect and summarize ADRs from journal articles, rank them and present them to physicians in a user-friendly interface. The method studied ADRs for 6 drugs and returned on average 4.8 ADRs that were correct. The results demonstrated this method was feasible and effective. This method can be applied in clinical practice for assisting physicians to efficiently obtain information about ADRs associated with specific drugs. Automated summarization of ADR information from recent publications may facilitate translation of academic research into actionable information at point of care. American Medical Informatics Association 2016-07-20 /pmc/articles/PMC5001779/ /pubmed/27570654 Text en ©2016 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Finkelstein, Joseph
Chen, Qinlang
Adams, Hayden
Friedman, Carol
Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title_full Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title_fullStr Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title_full_unstemmed Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title_short Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed
title_sort automated summarization of publications associated with adverse drug reactions from pubmed
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001779/
https://www.ncbi.nlm.nih.gov/pubmed/27570654
work_keys_str_mv AT finkelsteinjoseph automatedsummarizationofpublicationsassociatedwithadversedrugreactionsfrompubmed
AT chenqinlang automatedsummarizationofpublicationsassociatedwithadversedrugreactionsfrompubmed
AT adamshayden automatedsummarizationofpublicationsassociatedwithadversedrugreactionsfrompubmed
AT friedmancarol automatedsummarizationofpublicationsassociatedwithadversedrugreactionsfrompubmed