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Random rotation survival forest for high dimensional censored data
Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dim...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001968/ https://www.ncbi.nlm.nih.gov/pubmed/27625979 http://dx.doi.org/10.1186/s40064-016-3113-5 |
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author | Zhou, Lifeng Wang, Hong Xu, Qingsong |
author_facet | Zhou, Lifeng Wang, Hong Xu, Qingsong |
author_sort | Zhou, Lifeng |
collection | PubMed |
description | Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dimensional censored time-to-event data analysis by combing random subspace, bagging and rotation forest. Supported by proper statistical analysis, we show that the proposed method random rotation survival forest outperforms state-of-the-art survival ensembles such as random survival forest and popular regularized Cox models. |
format | Online Article Text |
id | pubmed-5001968 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-50019682016-09-13 Random rotation survival forest for high dimensional censored data Zhou, Lifeng Wang, Hong Xu, Qingsong Springerplus Research Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dimensional censored time-to-event data analysis by combing random subspace, bagging and rotation forest. Supported by proper statistical analysis, we show that the proposed method random rotation survival forest outperforms state-of-the-art survival ensembles such as random survival forest and popular regularized Cox models. Springer International Publishing 2016-08-26 /pmc/articles/PMC5001968/ /pubmed/27625979 http://dx.doi.org/10.1186/s40064-016-3113-5 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Zhou, Lifeng Wang, Hong Xu, Qingsong Random rotation survival forest for high dimensional censored data |
title | Random rotation survival forest for high dimensional censored data |
title_full | Random rotation survival forest for high dimensional censored data |
title_fullStr | Random rotation survival forest for high dimensional censored data |
title_full_unstemmed | Random rotation survival forest for high dimensional censored data |
title_short | Random rotation survival forest for high dimensional censored data |
title_sort | random rotation survival forest for high dimensional censored data |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001968/ https://www.ncbi.nlm.nih.gov/pubmed/27625979 http://dx.doi.org/10.1186/s40064-016-3113-5 |
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