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Random rotation survival forest for high dimensional censored data

Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dim...

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Detalles Bibliográficos
Autores principales: Zhou, Lifeng, Wang, Hong, Xu, Qingsong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001968/
https://www.ncbi.nlm.nih.gov/pubmed/27625979
http://dx.doi.org/10.1186/s40064-016-3113-5
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author Zhou, Lifeng
Wang, Hong
Xu, Qingsong
author_facet Zhou, Lifeng
Wang, Hong
Xu, Qingsong
author_sort Zhou, Lifeng
collection PubMed
description Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dimensional censored time-to-event data analysis by combing random subspace, bagging and rotation forest. Supported by proper statistical analysis, we show that the proposed method random rotation survival forest outperforms state-of-the-art survival ensembles such as random survival forest and popular regularized Cox models.
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spelling pubmed-50019682016-09-13 Random rotation survival forest for high dimensional censored data Zhou, Lifeng Wang, Hong Xu, Qingsong Springerplus Research Recently, rotation forest has been extended to regression and survival analysis problems. However, due to intensive computation incurred by principal component analysis, rotation forest often fails when high-dimensional or big data are confronted. In this study, we extend rotation forest to high dimensional censored time-to-event data analysis by combing random subspace, bagging and rotation forest. Supported by proper statistical analysis, we show that the proposed method random rotation survival forest outperforms state-of-the-art survival ensembles such as random survival forest and popular regularized Cox models. Springer International Publishing 2016-08-26 /pmc/articles/PMC5001968/ /pubmed/27625979 http://dx.doi.org/10.1186/s40064-016-3113-5 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Zhou, Lifeng
Wang, Hong
Xu, Qingsong
Random rotation survival forest for high dimensional censored data
title Random rotation survival forest for high dimensional censored data
title_full Random rotation survival forest for high dimensional censored data
title_fullStr Random rotation survival forest for high dimensional censored data
title_full_unstemmed Random rotation survival forest for high dimensional censored data
title_short Random rotation survival forest for high dimensional censored data
title_sort random rotation survival forest for high dimensional censored data
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001968/
https://www.ncbi.nlm.nih.gov/pubmed/27625979
http://dx.doi.org/10.1186/s40064-016-3113-5
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