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Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields

BACKGROUND: Magnetic Resonance Imaging (MRI) is a crucial medical imaging technology for the screening and diagnosis of frequently occurring cancers. However, image quality may suffer from long acquisition times for MRIs due to patient motion, which also leads to patient discomfort. Reducing MRI acq...

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Autores principales: Li, Edward, Khalvati, Farzad, Shafiee, Mohammad Javad, Haider, Masoom A., Wong, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5002135/
https://www.ncbi.nlm.nih.gov/pubmed/27566536
http://dx.doi.org/10.1186/s12880-016-0156-6
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author Li, Edward
Khalvati, Farzad
Shafiee, Mohammad Javad
Haider, Masoom A.
Wong, Alexander
author_facet Li, Edward
Khalvati, Farzad
Shafiee, Mohammad Javad
Haider, Masoom A.
Wong, Alexander
author_sort Li, Edward
collection PubMed
description BACKGROUND: Magnetic Resonance Imaging (MRI) is a crucial medical imaging technology for the screening and diagnosis of frequently occurring cancers. However, image quality may suffer from long acquisition times for MRIs due to patient motion, which also leads to patient discomfort. Reducing MRI acquisition times can reduce patient discomfort leading to reduced motion artifacts from the acquisition process. Compressive sensing strategies applied to MRI have been demonstrated to be effective in decreasing acquisition times significantly by sparsely sampling the k-space during the acquisition process. However, such a strategy requires advanced reconstruction algorithms to produce high quality and reliable images from compressive sensing MRI. METHODS: This paper proposes a new reconstruction approach based on cross-domain stochastically fully connected conditional random fields (CD-SFCRF) for compressive sensing MRI. The CD-SFCRF introduces constraints in both k-space and spatial domains within a stochastically fully connected graphical model to produce improved MRI reconstruction. RESULTS: Experimental results using T2-weighted (T2w) imaging and diffusion-weighted imaging (DWI) of the prostate show strong performance in preserving fine details and tissue structures in the reconstructed images when compared to other tested methods even at low sampling rates. CONCLUSIONS: The ability to better utilize a limited amount of information to reconstruct T2w and DWI images in a short amount of time while preserving the important details in the images demonstrates the potential of the proposed CD-SFCRF framework as a viable reconstruction algorithm for compressive sensing MRI.
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spelling pubmed-50021352016-08-28 Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields Li, Edward Khalvati, Farzad Shafiee, Mohammad Javad Haider, Masoom A. Wong, Alexander BMC Med Imaging Technical Advance BACKGROUND: Magnetic Resonance Imaging (MRI) is a crucial medical imaging technology for the screening and diagnosis of frequently occurring cancers. However, image quality may suffer from long acquisition times for MRIs due to patient motion, which also leads to patient discomfort. Reducing MRI acquisition times can reduce patient discomfort leading to reduced motion artifacts from the acquisition process. Compressive sensing strategies applied to MRI have been demonstrated to be effective in decreasing acquisition times significantly by sparsely sampling the k-space during the acquisition process. However, such a strategy requires advanced reconstruction algorithms to produce high quality and reliable images from compressive sensing MRI. METHODS: This paper proposes a new reconstruction approach based on cross-domain stochastically fully connected conditional random fields (CD-SFCRF) for compressive sensing MRI. The CD-SFCRF introduces constraints in both k-space and spatial domains within a stochastically fully connected graphical model to produce improved MRI reconstruction. RESULTS: Experimental results using T2-weighted (T2w) imaging and diffusion-weighted imaging (DWI) of the prostate show strong performance in preserving fine details and tissue structures in the reconstructed images when compared to other tested methods even at low sampling rates. CONCLUSIONS: The ability to better utilize a limited amount of information to reconstruct T2w and DWI images in a short amount of time while preserving the important details in the images demonstrates the potential of the proposed CD-SFCRF framework as a viable reconstruction algorithm for compressive sensing MRI. BioMed Central 2016-08-26 /pmc/articles/PMC5002135/ /pubmed/27566536 http://dx.doi.org/10.1186/s12880-016-0156-6 Text en © The Author(s) 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Technical Advance
Li, Edward
Khalvati, Farzad
Shafiee, Mohammad Javad
Haider, Masoom A.
Wong, Alexander
Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title_full Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title_fullStr Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title_full_unstemmed Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title_short Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields
title_sort sparse reconstruction of compressive sensing mri using cross-domain stochastically fully connected conditional random fields
topic Technical Advance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5002135/
https://www.ncbi.nlm.nih.gov/pubmed/27566536
http://dx.doi.org/10.1186/s12880-016-0156-6
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