Molmil: a molecular viewer for the PDB and beyond

We have developed a new platform-independent web-based molecular viewer using JavaScript and WebGL. The molecular viewer, Molmil, has been integrated into several services offered by Protein Data Bank Japan and can be easily extended with new functionality by third party developers. Furthermore, the...

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Detalles Bibliográficos
Autores principales: Bekker, Gert-Jan, Nakamura, Haruki, Kinjo, Akira R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5002144/
https://www.ncbi.nlm.nih.gov/pubmed/27570544
http://dx.doi.org/10.1186/s13321-016-0155-1
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author Bekker, Gert-Jan
Nakamura, Haruki
Kinjo, Akira R.
author_facet Bekker, Gert-Jan
Nakamura, Haruki
Kinjo, Akira R.
author_sort Bekker, Gert-Jan
collection PubMed
description We have developed a new platform-independent web-based molecular viewer using JavaScript and WebGL. The molecular viewer, Molmil, has been integrated into several services offered by Protein Data Bank Japan and can be easily extended with new functionality by third party developers. Furthermore, the viewer can be used to load files in various formats from the user’s local hard drive without uploading the data to a server. Molmil is available for all platforms supporting WebGL (e.g. Windows, Linux, iOS, Android) from http://gjbekker.github.io/molmil/. The source code is available at http://github.com/gjbekker/molmil under the LGPLv3 licence. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13321-016-0155-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-50021442016-08-28 Molmil: a molecular viewer for the PDB and beyond Bekker, Gert-Jan Nakamura, Haruki Kinjo, Akira R. J Cheminform Software We have developed a new platform-independent web-based molecular viewer using JavaScript and WebGL. The molecular viewer, Molmil, has been integrated into several services offered by Protein Data Bank Japan and can be easily extended with new functionality by third party developers. Furthermore, the viewer can be used to load files in various formats from the user’s local hard drive without uploading the data to a server. Molmil is available for all platforms supporting WebGL (e.g. Windows, Linux, iOS, Android) from http://gjbekker.github.io/molmil/. The source code is available at http://github.com/gjbekker/molmil under the LGPLv3 licence. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13321-016-0155-1) contains supplementary material, which is available to authorized users. Springer International Publishing 2016-08-26 /pmc/articles/PMC5002144/ /pubmed/27570544 http://dx.doi.org/10.1186/s13321-016-0155-1 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Software
Bekker, Gert-Jan
Nakamura, Haruki
Kinjo, Akira R.
Molmil: a molecular viewer for the PDB and beyond
title Molmil: a molecular viewer for the PDB and beyond
title_full Molmil: a molecular viewer for the PDB and beyond
title_fullStr Molmil: a molecular viewer for the PDB and beyond
title_full_unstemmed Molmil: a molecular viewer for the PDB and beyond
title_short Molmil: a molecular viewer for the PDB and beyond
title_sort molmil: a molecular viewer for the pdb and beyond
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5002144/
https://www.ncbi.nlm.nih.gov/pubmed/27570544
http://dx.doi.org/10.1186/s13321-016-0155-1
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