Cargando…

Software Framework for Controlling Unsupervised Scientific Instruments

Science outreach and communication are gaining more and more importance for conveying the meaning of today’s research to the general public. Public exhibitions of scientific instruments can provide hands-on experience with technical advances and their applications in the life sciences. The software...

Descripción completa

Detalles Bibliográficos
Autores principales: Schmid, Benjamin, Jahr, Wiebke, Weber, Michael, Huisken, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003368/
https://www.ncbi.nlm.nih.gov/pubmed/27570966
http://dx.doi.org/10.1371/journal.pone.0161671
_version_ 1782450637997342720
author Schmid, Benjamin
Jahr, Wiebke
Weber, Michael
Huisken, Jan
author_facet Schmid, Benjamin
Jahr, Wiebke
Weber, Michael
Huisken, Jan
author_sort Schmid, Benjamin
collection PubMed
description Science outreach and communication are gaining more and more importance for conveying the meaning of today’s research to the general public. Public exhibitions of scientific instruments can provide hands-on experience with technical advances and their applications in the life sciences. The software of such devices, however, is oftentimes not appropriate for this purpose. In this study, we describe a software framework and the necessary computer configuration that is well suited for exposing a complex self-built and software-controlled instrument such as a microscope to laymen under limited supervision, e.g. in museums or schools. We identify several aspects that must be met by such software, and we describe a design that can simultaneously be used to control either (i) a fully functional instrument in a robust and fail-safe manner, (ii) an instrument that has low-cost or only partially working hardware attached for illustration purposes or (iii) a completely virtual instrument without hardware attached. We describe how to assess the educational success of such a device, how to monitor its operation and how to facilitate its maintenance. The introduced concepts are illustrated using our software to control eduSPIM, a fluorescent light sheet microscope that we are currently exhibiting in a technical museum.
format Online
Article
Text
id pubmed-5003368
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-50033682016-09-12 Software Framework for Controlling Unsupervised Scientific Instruments Schmid, Benjamin Jahr, Wiebke Weber, Michael Huisken, Jan PLoS One Research Article Science outreach and communication are gaining more and more importance for conveying the meaning of today’s research to the general public. Public exhibitions of scientific instruments can provide hands-on experience with technical advances and their applications in the life sciences. The software of such devices, however, is oftentimes not appropriate for this purpose. In this study, we describe a software framework and the necessary computer configuration that is well suited for exposing a complex self-built and software-controlled instrument such as a microscope to laymen under limited supervision, e.g. in museums or schools. We identify several aspects that must be met by such software, and we describe a design that can simultaneously be used to control either (i) a fully functional instrument in a robust and fail-safe manner, (ii) an instrument that has low-cost or only partially working hardware attached for illustration purposes or (iii) a completely virtual instrument without hardware attached. We describe how to assess the educational success of such a device, how to monitor its operation and how to facilitate its maintenance. The introduced concepts are illustrated using our software to control eduSPIM, a fluorescent light sheet microscope that we are currently exhibiting in a technical museum. Public Library of Science 2016-08-29 /pmc/articles/PMC5003368/ /pubmed/27570966 http://dx.doi.org/10.1371/journal.pone.0161671 Text en © 2016 Schmid et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Schmid, Benjamin
Jahr, Wiebke
Weber, Michael
Huisken, Jan
Software Framework for Controlling Unsupervised Scientific Instruments
title Software Framework for Controlling Unsupervised Scientific Instruments
title_full Software Framework for Controlling Unsupervised Scientific Instruments
title_fullStr Software Framework for Controlling Unsupervised Scientific Instruments
title_full_unstemmed Software Framework for Controlling Unsupervised Scientific Instruments
title_short Software Framework for Controlling Unsupervised Scientific Instruments
title_sort software framework for controlling unsupervised scientific instruments
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003368/
https://www.ncbi.nlm.nih.gov/pubmed/27570966
http://dx.doi.org/10.1371/journal.pone.0161671
work_keys_str_mv AT schmidbenjamin softwareframeworkforcontrollingunsupervisedscientificinstruments
AT jahrwiebke softwareframeworkforcontrollingunsupervisedscientificinstruments
AT webermichael softwareframeworkforcontrollingunsupervisedscientificinstruments
AT huiskenjan softwareframeworkforcontrollingunsupervisedscientificinstruments