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Uncovering representations of sleep-associated hippocampal ensemble spike activity
Pyramidal neurons in the rodent hippocampus exhibit spatial tuning during spatial navigation, and they are reactivated in specific temporal order during sharp-wave ripples observed in quiet wakefulness or slow wave sleep. However, analyzing representations of sleep-associated hippocampal ensemble sp...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004124/ https://www.ncbi.nlm.nih.gov/pubmed/27573200 http://dx.doi.org/10.1038/srep32193 |
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author | Chen, Zhe Grosmark, Andres D. Penagos, Hector Wilson, Matthew A. |
author_facet | Chen, Zhe Grosmark, Andres D. Penagos, Hector Wilson, Matthew A. |
author_sort | Chen, Zhe |
collection | PubMed |
description | Pyramidal neurons in the rodent hippocampus exhibit spatial tuning during spatial navigation, and they are reactivated in specific temporal order during sharp-wave ripples observed in quiet wakefulness or slow wave sleep. However, analyzing representations of sleep-associated hippocampal ensemble spike activity remains a great challenge. In contrast to wake, during sleep there is a complete absence of animal behavior, and the ensemble spike activity is sparse (low occurrence) and fragmental in time. To examine important issues encountered in sleep data analysis, we constructed synthetic sleep-like hippocampal spike data (short epochs, sparse and sporadic firing, compressed timescale) for detailed investigations. Based upon two Bayesian population-decoding methods (one receptive field-based, and the other not), we systematically investigated their representation power and detection reliability. Notably, the receptive-field-free decoding method was found to be well-tuned for hippocampal ensemble spike data in slow wave sleep (SWS), even in the absence of prior behavioral measure or ground truth. Our results showed that in addition to the sample length, bin size, and firing rate, number of active hippocampal pyramidal neurons are critical for reliable representation of the space as well as for detection of spatiotemporal reactivated patterns in SWS or quiet wakefulness. |
format | Online Article Text |
id | pubmed-5004124 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50041242016-09-07 Uncovering representations of sleep-associated hippocampal ensemble spike activity Chen, Zhe Grosmark, Andres D. Penagos, Hector Wilson, Matthew A. Sci Rep Article Pyramidal neurons in the rodent hippocampus exhibit spatial tuning during spatial navigation, and they are reactivated in specific temporal order during sharp-wave ripples observed in quiet wakefulness or slow wave sleep. However, analyzing representations of sleep-associated hippocampal ensemble spike activity remains a great challenge. In contrast to wake, during sleep there is a complete absence of animal behavior, and the ensemble spike activity is sparse (low occurrence) and fragmental in time. To examine important issues encountered in sleep data analysis, we constructed synthetic sleep-like hippocampal spike data (short epochs, sparse and sporadic firing, compressed timescale) for detailed investigations. Based upon two Bayesian population-decoding methods (one receptive field-based, and the other not), we systematically investigated their representation power and detection reliability. Notably, the receptive-field-free decoding method was found to be well-tuned for hippocampal ensemble spike data in slow wave sleep (SWS), even in the absence of prior behavioral measure or ground truth. Our results showed that in addition to the sample length, bin size, and firing rate, number of active hippocampal pyramidal neurons are critical for reliable representation of the space as well as for detection of spatiotemporal reactivated patterns in SWS or quiet wakefulness. Nature Publishing Group 2016-08-30 /pmc/articles/PMC5004124/ /pubmed/27573200 http://dx.doi.org/10.1038/srep32193 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Chen, Zhe Grosmark, Andres D. Penagos, Hector Wilson, Matthew A. Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title | Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title_full | Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title_fullStr | Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title_full_unstemmed | Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title_short | Uncovering representations of sleep-associated hippocampal ensemble spike activity |
title_sort | uncovering representations of sleep-associated hippocampal ensemble spike activity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004124/ https://www.ncbi.nlm.nih.gov/pubmed/27573200 http://dx.doi.org/10.1038/srep32193 |
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