The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472

The genome of Chromobacterium subtsugae strain PRAA4-1, a betaproteobacterium producing insecticidal compounds, was sequenced and compared with the genome of C. violaceum ATCC 12472. The genome of C. subtsugae displayed a reduction in genes devoted to capsular and extracellular polysaccharide, posse...

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Autores principales: Blackburn, Michael B., Sparks, Michael E., Gundersen-Rindal, Dawn E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Regular Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004236/
https://www.ncbi.nlm.nih.gov/pubmed/27617206
http://dx.doi.org/10.1016/j.gdata.2016.08.013
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author Blackburn, Michael B.
Sparks, Michael E.
Gundersen-Rindal, Dawn E.
author_facet Blackburn, Michael B.
Sparks, Michael E.
Gundersen-Rindal, Dawn E.
author_sort Blackburn, Michael B.
collection PubMed
description The genome of Chromobacterium subtsugae strain PRAA4-1, a betaproteobacterium producing insecticidal compounds, was sequenced and compared with the genome of C. violaceum ATCC 12472. The genome of C. subtsugae displayed a reduction in genes devoted to capsular and extracellular polysaccharide, possessed no genes encoding nitrate reductases, and exhibited many more phage-related sequences than were observed for C. violaceum. The genomes of both species possess a number of gene clusters predicted to encode biosynthetic complexes for secondary metabolites; these clusters suggest they produce overlapping, but distinct assortments of metabolites.
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spelling pubmed-50042362016-09-09 The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472 Blackburn, Michael B. Sparks, Michael E. Gundersen-Rindal, Dawn E. Genom Data Regular Article The genome of Chromobacterium subtsugae strain PRAA4-1, a betaproteobacterium producing insecticidal compounds, was sequenced and compared with the genome of C. violaceum ATCC 12472. The genome of C. subtsugae displayed a reduction in genes devoted to capsular and extracellular polysaccharide, possessed no genes encoding nitrate reductases, and exhibited many more phage-related sequences than were observed for C. violaceum. The genomes of both species possess a number of gene clusters predicted to encode biosynthetic complexes for secondary metabolites; these clusters suggest they produce overlapping, but distinct assortments of metabolites. Elsevier 2016-08-24 /pmc/articles/PMC5004236/ /pubmed/27617206 http://dx.doi.org/10.1016/j.gdata.2016.08.013 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Blackburn, Michael B.
Sparks, Michael E.
Gundersen-Rindal, Dawn E.
The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title_full The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title_fullStr The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title_full_unstemmed The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title_short The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
title_sort genome of the insecticidal chromobacterium subtsugae praa4-1 and its comparison with that of chromobacterium violaceum atcc 12472
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004236/
https://www.ncbi.nlm.nih.gov/pubmed/27617206
http://dx.doi.org/10.1016/j.gdata.2016.08.013
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