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Genome-wide association study of drought-related resistance traits in Aegilops tauschii

The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated...

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Autores principales: Qin, Peng, Lin, Yu, Hu, Yaodong, Liu, Kun, Mao, Shuangshuang, Li, Zhanyi, Wang, Jirui, Liu, Yaxi, Wei, Yuming, Zheng, Youliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004832/
https://www.ncbi.nlm.nih.gov/pubmed/27560650
http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232
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author Qin, Peng
Lin, Yu
Hu, Yaodong
Liu, Kun
Mao, Shuangshuang
Li, Zhanyi
Wang, Jirui
Liu, Yaxi
Wei, Yuming
Zheng, Youliang
author_facet Qin, Peng
Lin, Yu
Hu, Yaodong
Liu, Kun
Mao, Shuangshuang
Li, Zhanyi
Wang, Jirui
Liu, Yaxi
Wei, Yuming
Zheng, Youliang
author_sort Qin, Peng
collection PubMed
description The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches revealed several candidate/flanking genes related to drought resistance that were grouped into three categories according to the type of encoded protein (enzyme, storage protein, and drought-induced protein). This study provided essential information for SNPs and genes related to drought resistance in A. tauschii and wheat, and represents a foundation for breeding drought-resistant wheat cultivars using marker-assisted selection.
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spelling pubmed-50048322016-09-13 Genome-wide association study of drought-related resistance traits in Aegilops tauschii Qin, Peng Lin, Yu Hu, Yaodong Liu, Kun Mao, Shuangshuang Li, Zhanyi Wang, Jirui Liu, Yaxi Wei, Yuming Zheng, Youliang Genet Mol Biol Plant Genetics The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches revealed several candidate/flanking genes related to drought resistance that were grouped into three categories according to the type of encoded protein (enzyme, storage protein, and drought-induced protein). This study provided essential information for SNPs and genes related to drought resistance in A. tauschii and wheat, and represents a foundation for breeding drought-resistant wheat cultivars using marker-assisted selection. Sociedade Brasileira de Genética 2016-07-07 2016 /pmc/articles/PMC5004832/ /pubmed/27560650 http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232 Text en Copyright © 2016, Sociedade Brasileira de Genética. http://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Plant Genetics
Qin, Peng
Lin, Yu
Hu, Yaodong
Liu, Kun
Mao, Shuangshuang
Li, Zhanyi
Wang, Jirui
Liu, Yaxi
Wei, Yuming
Zheng, Youliang
Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title_full Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title_fullStr Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title_full_unstemmed Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title_short Genome-wide association study of drought-related resistance traits in Aegilops tauschii
title_sort genome-wide association study of drought-related resistance traits in aegilops tauschii
topic Plant Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004832/
https://www.ncbi.nlm.nih.gov/pubmed/27560650
http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232
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