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Genome-wide association study of drought-related resistance traits in Aegilops tauschii
The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004832/ https://www.ncbi.nlm.nih.gov/pubmed/27560650 http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232 |
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author | Qin, Peng Lin, Yu Hu, Yaodong Liu, Kun Mao, Shuangshuang Li, Zhanyi Wang, Jirui Liu, Yaxi Wei, Yuming Zheng, Youliang |
author_facet | Qin, Peng Lin, Yu Hu, Yaodong Liu, Kun Mao, Shuangshuang Li, Zhanyi Wang, Jirui Liu, Yaxi Wei, Yuming Zheng, Youliang |
author_sort | Qin, Peng |
collection | PubMed |
description | The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches revealed several candidate/flanking genes related to drought resistance that were grouped into three categories according to the type of encoded protein (enzyme, storage protein, and drought-induced protein). This study provided essential information for SNPs and genes related to drought resistance in A. tauschii and wheat, and represents a foundation for breeding drought-resistant wheat cultivars using marker-assisted selection. |
format | Online Article Text |
id | pubmed-5004832 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-50048322016-09-13 Genome-wide association study of drought-related resistance traits in Aegilops tauschii Qin, Peng Lin, Yu Hu, Yaodong Liu, Kun Mao, Shuangshuang Li, Zhanyi Wang, Jirui Liu, Yaxi Wei, Yuming Zheng, Youliang Genet Mol Biol Plant Genetics The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches revealed several candidate/flanking genes related to drought resistance that were grouped into three categories according to the type of encoded protein (enzyme, storage protein, and drought-induced protein). This study provided essential information for SNPs and genes related to drought resistance in A. tauschii and wheat, and represents a foundation for breeding drought-resistant wheat cultivars using marker-assisted selection. Sociedade Brasileira de Genética 2016-07-07 2016 /pmc/articles/PMC5004832/ /pubmed/27560650 http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232 Text en Copyright © 2016, Sociedade Brasileira de Genética. http://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Plant Genetics Qin, Peng Lin, Yu Hu, Yaodong Liu, Kun Mao, Shuangshuang Li, Zhanyi Wang, Jirui Liu, Yaxi Wei, Yuming Zheng, Youliang Genome-wide association study of drought-related resistance traits in Aegilops tauschii |
title | Genome-wide association study of drought-related resistance traits in Aegilops tauschii
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title_full | Genome-wide association study of drought-related resistance traits in Aegilops tauschii
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title_fullStr | Genome-wide association study of drought-related resistance traits in Aegilops tauschii
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title_full_unstemmed | Genome-wide association study of drought-related resistance traits in Aegilops tauschii
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title_short | Genome-wide association study of drought-related resistance traits in Aegilops tauschii
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title_sort | genome-wide association study of drought-related resistance traits in aegilops tauschii |
topic | Plant Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004832/ https://www.ncbi.nlm.nih.gov/pubmed/27560650 http://dx.doi.org/10.1590/1678-4685-GMB-2015-0232 |
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